hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-16533765/chunk_1/iprscan-20080806-16533765.nocrc
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Query sequence: af00036
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00685.17.fs   Sulfotransferase domain                 288.7      1e-83   1
PF00685.17.ls   Sulfotransferase domain                 245.7    9.2e-71   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00685.17.ls     1/1       3   240 ..     1   342 []   245.7  9.2e-71
PF00685.17.fs     1/1      77   240 ..   144   342 .]   288.7    1e-83

Alignments of top-scoring domains:
PF00685.17.ls: domain 1 of 1, from 3 to 240: score 245.7, E = 9.2e-71
                   *->pdDvlivtyPKSGTTWlqeilslqdiFYlFePLwhvEipnrgdfssp
                      + D + + y       l   + l                        
     af00036     3    DADYITIEYDG-----LRDQAGL------------------------ 20   

                   ekceepplfnnphnrvPfLEwymlffPetlesvppesdrlrecgllnltl
                        ++l      rv  L w     P+  +++                 
     af00036    21 -----WLL-----SRVQLLTW-----PYRCREISN--------------- 40   

                   aleklasyfhveegverlkalpsP....Rlik...THLPlhlLPkslwds
                        +s++++ + ++ + ++++P+++  +++ + +              
     af00036    41 -----KSASKPQVPPLPIQEMSWPgtgcVVMVlglS------------LL 73   

                   kcKiIYvvRNPKDvaVSyYhfsrmakewmkwlervilpapgtpsfevlan
                    + ++Yv+RN+KDvaVSyYhf+ mak          +p+pgt  ++    
     af00036    74 PLQVVYVARNAKDVAVSYYHFYHMAK---------VHPEPGT--WD---- 108  

                   aleffelFlaGkvvyGsyfdHvkgWweaSlrkpenvLflsYEdlkkDPrg
                     +f+e+F+ G v+yGs+++Hv++Wwe  l+  ++vL+l+YEd+k++P++
     af00036   109 --SFLEKFMVGEVSYGSWYQHVQEWWE--LSRTHPVLYLFYEDMKENPKR 154  

                   eikkiaeFLGkplseEeEeGrldkivkhlsFenmKgnpcvnyselpkeim
                   ei+ki+eF G++l+eE+    +d +v+h+sF++mK+np++ny++ p+e m
     af00036   155 EIQKILEFVGRSLPEET----VDFMVQHTSFKEMKKNPMTNYTTVPQEFM 200  

                   dhensiEnspffRKGivgdWGRqknhftveqaekfdeiyehNklsekmkg
                   dh  si  spf+RKG +gdW   k +ftv+q+e+fd+ y      ekm+g
     af00036   201 DH--SI--SPFMRKGMAGDW---KTTFTVAQNERFDADYA-----EKMAG 238  

                   tg<-*
                   +    
     af00036   239 CS    240  

PF00685.17.fs: domain 1 of 1, from 77 to 240: score 288.7, E = 1e-83
                   *->iIYvvRNPKDvaVSyYhfsrmakewmkwlervilpapgtpsfevlan
                      ++Yv+RN+KDvaVSyYhf+ mak          +p+pgt  ++    
     af00036    77    VVYVARNAKDVAVSYYHFYHMAK---------VHPEPGT--WD---- 108  

                   aleffelFlaGkvvyGsyfdHvkgWweaSlrkpenvLflsYEdlkkDPrg
                     +f+e+F+ G v+yGs+++Hv++Wwe  l+  ++vL+l+YEd+k++P++
     af00036   109 --SFLEKFMVGEVSYGSWYQHVQEWWE--LSRTHPVLYLFYEDMKENPKR 154  

                   eikkiaeFLGkplseEeEeGrldkivkhlsFenmKgnpcvnyselpkeim
                   ei+ki+eF G++l+eE+    +d +v+h+sF++mK+np++ny++ p+e m
     af00036   155 EIQKILEFVGRSLPEET----VDFMVQHTSFKEMKKNPMTNYTTVPQEFM 200  

                   dhensiEnspffRKGivgdWGRqknhftveqaekfdeiyehNklsekmkg
                   dh  si  spf+RKG +gdW   k +ftv+q+e+fd+ y      ekm+g
     af00036   201 DH--SI--SPFMRKGMAGDW---KTTFTVAQNERFDADYA-----EKMAG 238  

                   tg<-*
                   +    
     af00036   239 CS    240  

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