hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-19202138/chunk_1/iprscan-20090617-19202138.nocrc
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Query sequence: af29877
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00249                                                  34.8    1.2e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00249    1/1    1977  2024 ..     1    39 []    34.8  1.2e-05

Alignments of top-scoring domains:
SM00249: domain 1 of 1, from 1977 to 2024: score 34.8, E = 1.2e-05
                   *->yC.vCgk.g.llqCd.kgCdrwyHv.Clgpple...epdg.wyCprC
                       C++C++ g +l+C +kgC+  yH++C+  +++  +e++++ +Cp++
     af29877  1977    KCsHCQEaGaTLGCYnKGCSFRYHYpCAIDADCllhEENFsVRCPKH 2023 

                   k<-*
                   k   
     af29877  2024 K    2024 

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