hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-18434593/chunk_1/iprscan-20080806-18434593.nocrc
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Query sequence: ag00037
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00022                                                 -75.0    1.6e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00022    1/1      26   533 ..     1   626 []   -75.0  1.6e-08

Alignments of top-scoring domains:
SM00022: domain 1 of 1, from 26 to 533: score -75.0, E = 1.6e-08
                   *->kaearsakntvdsYapylvsCpsddinlvRsam.....alsdnEsef
                      +   ++ + + ++   +  s ps+   ++R+ + + + +++ +E +f
     ag00037    26    RDLGSLQPPPLGFKRFSCLSLPSSWDYRLRELAvrlgfGPCAEEQAF 72   

                   lqkRkektkealKsFLgransnfldsslLskLFhssNssdvPkIaiAvSG
                   l+ Rk+++  al+  L+   ++++               ++P++ai   G
     ag00037    73 LSRRKQVVAAALRQALQ---LDGDLQE-----------DEIPVVAIMATG 108  

                   GGyRAMlgGaGvlkAmDeRTDganehgLgGLLqsatYiAGLSGGsWlvgt
                   GG RAM +  G l+ + e           GLL++  Yi G+SG++W +  
     ag00037   109 GGIRAMTSLYGQLAGLKE----------LGLLDCVSYITGASGSTWALAN 148  

                   LavnNftsvkdivdgpeeidseWdlehSilenpgginllttaaqrykslv
                   L+  ++ s kd + gp+e   ++   +  +    ++ +l +  +   ++ 
     ag00037   149 LYEDPEWSQKD-LAGPTE---LLKTQVTKN----KLGVLAP--SQLQRYR 188  

                   davdkKkdAGFniSLTDiWGRaivqrLsynlfdslyrGgpnitlSslrdq
                   +++++ +  G++  +T +W+ +    + + l ++     ++ +lS+ r++
     ag00037   189 QELAERARLGYPSCFTNLWA-L----INEALLHDE---PHDHKLSDQREA 230  

                   ekfqnaemPlPIfvad.grkPgesvinlNatvFEFsPfEfGsWDpklnaF
                      + ++ PlPI  a++++    +   +  +  EFsP+E G   pk++aF
     ag00037   231 --LSHGQNPLPIYCALnTKGQSLTTFEFGEW-CEFSPYEVGF--PKYGAF 275  

                   vpveYLGskffnGspvkkgkCiagfDnaGFimgTSSsLFNqvLlvsWnLa
                   +p e++Gs ff+G++ k+  + +  ++ G +    S L    L       
     ag00037   276 IPSELFGSEFFMGQLMKRLPESRICFLEGIW----SNLYAANLQ------ 315  

                   sqssreamkqqsnstmleslikdiikhilkdlSsdsdDiAiyaPNPFkdt
                             +    +++s   d+      +l++++         P    
     ag00037   316 ---------DSLYWASEPSQFWDRWVRNQANLDKEQVPLLKIE-EPP--- 352  

                   aeeeyQndnQasyvqreltnslgdsdlLnLVDGRAGKVHNFMLGgedgen
                               ++   ++  ++d  lL+ +   A   HNF+ G+     
     ag00037   353 ------------STAGRIAEFFTD--LLTWRPL-AQATHNFLRGLHFHKD 387  

                   iPLsPLsdlqperdvDvifavDasaDtDefwPnGssLDVktYErqvvdqG
                   +  +P     + + +D      +   ++  +P    LDV     +++ + 
     ag00037   388 YFQHPHFSTWKATTLDGL---PNQLTPS--EPHLCLLDVGY---LINTSC 429  

                   ltsvfnlpFPyvpdqqtfVnLglstkptfFGCDssNlTdlNHTVdeyiPP
                   l        P+ + + + V+L+ls +   +G                   
     ag00037   430 L--------PL-LQPTRDVDLILSLDYNLHGA------------------ 452  

                   LvvylpNekwaynsniStfklsysdferegliNgyefaTvdnntdddcpt
                   +  + +  ++     i+++ +s+s  e ++  ++ +f+     t    p 
     ag00037   453 FQQLQLLGRFCQEQGIPFPPISPSPEEQLQPRECHTFSD---PTCPGAPA 499  

                   figCvacAiirRklealkknvtlpsecsqcFa.dYc<-*
                    +++ +    +R + a+  +v + +e+    + + +   
     ag00037   500 VLHFPLVSDSFREYSAP--GVRRTPEEAAAGEvNLS    533  

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