hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-10512565/chunk_1/iprscan-20090416-10512565.nocrc
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Query sequence: ag00172s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       253.2    4.9e-73   1
PF00069.15.fs Protein kinase domain                       251.3    1.9e-72   1
PF07714.7.fs Protein tyrosine kinase                      52.0    5.2e-15   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      68   361 ..     1   287 []   251.3  1.9e-72
PF00069.15.ls   1/1      68   361 ..     1   287 []   253.2  4.9e-73
PF07714.7.fs   1/1     107   248 ..    46   201 ..    52.0  5.2e-15

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 68 to 361: score 251.3, E = 1.9e-72
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e+++ lG+G+ G+V+k  hk +g  V   ++   ++k+  + + +r
   ag00172s1    68    FEKISELGAGNGGVVFKVSHKPSGL-VMARKLIHLEIKPAIRNQIIR 113  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     E+q+l+++++p+Iv ++++f++++++ +++E+++gG    +L  +l+ 
   ag00172s1   114 --ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG----SLDQVLK- 156  

                   trrkgpllfsedeakkialQilrgleYLHs.ngiiHRDLKPeNILldnng
                     + g++  +e+ + k+   +++gl YL ++++i+HRD+KP+NIL++++g
   ag00172s1   157 --KAGRI--PEQILGKVSIAVIKGLTYLREkHKIMHRDVKPSNILVNSRG 202  

                   vvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv
                   ++    K++DFG++       +s +++fvGT+ Ym+PE l+ g++y+  +
   ag00172s1   203 EI----KLCDFGVSG---QlIDSmANSFVGTRSYMSPERLQ-GTHYSVQS 244  

                   DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds
                   D+WS+G+ l e++ G+ P +       d ++l ++  g+++e d  e+ +
   ag00172s1   245 DIWSMGLSLVEMAVGRYPIPPP-----DAKEL-ELMFGCQVEGDAAETPP 288  

                   isrse.fr...........................r.l.pnlseeakdLi
                   ++r ++++ ++ + +++++    +  +   ++++++  +   s e++d++
   ag00172s1   289 RPRTPgRPlssygmdsrppmaifelldyivnepppKlPsGVFSLEFQDFV 338  

                   kkcLnkDPskRltaeeilqHPwf<-*
                   +kcL k+P++R   ++++ H ++   
   ag00172s1   339 NKCLIKNPAERADLKQLMVHAFI    361  

PF00069.15.ls: domain 1 of 1, from 68 to 361: score 253.2, E = 4.9e-73
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e+++ lG+G+ G+V+k  hk +g  V   ++   ++k+  + + +r
   ag00172s1    68    FEKISELGAGNGGVVFKVSHKPSGL-VMARKLIHLEIKPAIRNQIIR 113  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     E+q+l+++++p+Iv ++++f++++++ +++E+++gG    +L  +l+ 
   ag00172s1   114 --ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG----SLDQVLK- 156  

                   trrkgpllfsedeakkialQilrgleYLHs.ngiiHRDLKPeNILldnng
                     + g++  +e+ + k+   +++gl YL ++++i+HRD+KP+NIL++++g
   ag00172s1   157 --KAGRI--PEQILGKVSIAVIKGLTYLREkHKIMHRDVKPSNILVNSRG 202  

                   vvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv
                   ++    K++DFG++       +s +++fvGT+ Ym+PE l+ g++y+  +
   ag00172s1   203 EI----KLCDFGVSG---QlIDSmANSFVGTRSYMSPERLQ-GTHYSVQS 244  

                   DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds
                   D+WS+G+ l e++ G+ P +       d ++l ++  g+++e d  e+ +
   ag00172s1   245 DIWSMGLSLVEMAVGRYPIPPP-----DAKEL-ELMFGCQVEGDAAETPP 288  

                   isrse.fr...........................r.l.pnlseeakdLi
                   ++r ++++ ++ + +++++    +  +   ++++++  +   s e++d++
   ag00172s1   289 RPRTPgRPlssygmdsrppmaifelldyivnepppKlPsGVFSLEFQDFV 338  

                   kkcLnkDPskRltaeeilqHPwf<-*
                   +kcL k+P++R   ++++ H ++   
   ag00172s1   339 NKCLIKNPAERADLKQLMVHAFI    361  

PF07714.7.fs: domain 1 of 1, from 107 to 248: score 52.0, E = 5.2e-15
                   *->ieredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEym
                      i r   +rE++++ +  + p iV ++G+ +  ++     + i +E+m
   ag00172s1   107    I-RNQIIRELQVLHEC-NSPYIVGFYGAFYS-DGE----ISICMEHM 146  

                   egGdLldfLrkhregrpLtlkdLlsfalQiAkGMeYLeskn.fvHRDLAA
                    gG+L+  L+k    ++++ + L + +  + kG+ YL +k+++ HRD+  
   ag00172s1   147 DGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHkIMHRDVKP 193  

                   RNcLVsenlvVKIsDFGLaRdi.ynddyY.vrkkgggklPvkWmAPEslk
                    N+LV++ + +K +DFG + ++ ++  +  v +++        m+PE l+
   ag00172s1   194 SNILVNSRGEIKLCDFGVSGQLiDSMANSfVGTRS-------YMSPERLQ 236  

                   ygkFtskSDVWS<-*
                      ++++SD+WS   
   ag00172s1   237 GTHYSVQSDIWS    248  

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