hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-19024038/chunk_1/iprscan-20080806-19024038.nocrc
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Query sequence: ah00257
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02174.7.ls PTB domain (IRS-1 type)                        219.3    7.9e-63   1
PF02174.7.fs PTB domain (IRS-1 type)                        217.4      3e-62   1
PF00169.19.fs PH domain                                       68.7    1.8e-20   1
PF00169.19.ls PH domain                                       70.7    4.2e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/1      87   189 ..     1    92 []    68.7  1.8e-20
PF00169.19.ls   1/1      87   189 ..     1    92 []    70.7  4.2e-18
PF02174.7.fs   1/1     234   336 ..     1   108 []   217.4    3e-62
PF02174.7.ls   1/1     234   336 ..     1   108 []   219.3  7.9e-63

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 1, from 87 to 189: score 68.7, E = 1.8e-20
                   *->vikeGwLlkkggkkswkkRyfvLfd.......dvLlyykdkk.....
                      v k G+L+k +   s +kR+fvL+  ++ +++ +L+yy+++k+ +++
     ah00257    87    VRKVGYLRKPK---SMHKRFFVLRAaseaggpARLEYYENEKkwrhk 130  

                   .kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseeerke
                   ++ pk+sipL+++ ++ k  d+k+k+   + t+d+ ++ ++a+se e  +
     ah00257   131 sSAPKRSIPLESCfNINKRADSKNKHLVALYTrDE-HFAIAADSEAEQDS 179  

                   Wvkaiqsair<-*
                   W++a+ +++    
     ah00257   180 WYQALLQLHN    189  

PF00169.19.ls: domain 1 of 1, from 87 to 189: score 70.7, E = 4.2e-18
                   *->vikeGwLlkkggkkswkkRyfvLfd.......dvLlyykdkk.....
                      v k G+L+k +   s +kR+fvL+  ++ +++ +L+yy+++k+ +++
     ah00257    87    VRKVGYLRKPK---SMHKRFFVLRAaseaggpARLEYYENEKkwrhk 130  

                   .kkpkgsipLsgi.qvtkvpdnkrkncFeirt.dretlllqaeseeerke
                   ++ pk+sipL+++ ++ k  d+k+k+   + t+d+ ++ ++a+se e  +
     ah00257   131 sSAPKRSIPLESCfNINKRADSKNKHLVALYTrDE-HFAIAADSEAEQDS 179  

                   Wvkaiqsair<-*
                   W++a+ +++    
     ah00257   180 WYQALLQLHN    189  

PF02174.7.fs: domain 1 of 1, from 234 to 336: score 217.4, E = 3e-62
                   *->fkdvwvVvlkpeglerckllsGsyrLrltaetltLvrkgdilnpeve
                      fk+vw+V+lkp+gl+++k+l+G+yrL+lt++t+++v+    ln+e++
     ah00257   234    FKEVWQVILKPKGLGQTKNLIGIYRLCLTSKTISFVK----LNSEAA 276  

                   lvvwPLlslRRyGrtdasfFfFEaGRrCvsGpGeFtFQvdDsvvAqeIfq
                   +vv++L+++RR+G+ +++fFf+E+GR++v+GpGeF++QvdDsvvAq++++
     ah00257   277 AVVLQLMNIRRCGH-SENFFFIEVGRSAVTGPGEFWMQVDDSVVAQNMHE 325  

                   lvleamkalkn<-*
                   ++leam+a+++   
     ah00257   326 TILEAMRAMSD    336  

PF02174.7.ls: domain 1 of 1, from 234 to 336: score 219.3, E = 7.9e-63
                   *->fkdvwvVvlkpeglerckllsGsyrLrltaetltLvrkgdilnpeve
                      fk+vw+V+lkp+gl+++k+l+G+yrL+lt++t+++v+    ln+e++
     ah00257   234    FKEVWQVILKPKGLGQTKNLIGIYRLCLTSKTISFVK----LNSEAA 276  

                   lvvwPLlslRRyGrtdasfFfFEaGRrCvsGpGeFtFQvdDsvvAqeIfq
                   +vv++L+++RR+G+ +++fFf+E+GR++v+GpGeF++QvdDsvvAq++++
     ah00257   277 AVVLQLMNIRRCGH-SENFFFIEVGRSAVTGPGEFWMQVDDSVVAQNMHE 325  

                   lvleamkalkn<-*
                   ++leam+a+++   
     ah00257   326 TILEAMRAMSD    336  

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