hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080806/iprscan-20080806-19090943/chunk_1/iprscan-20080806-19090943.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ah00336 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00149.18.fs Calcineurin-like phosphoesterase 49.8 1e-12 1 PF00149.18.ls Calcineurin-like phosphoesterase 51.8 2.2e-12 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00149.18.fs 1/1 61 259 .. 1 124 [] 49.8 1e-12 PF00149.18.ls 1/1 61 259 .. 1 124 [] 51.8 2.2e-12 Alignments of top-scoring domains: PF00149.18.fs: domain 1 of 1, from 61 to 259: score 49.8, E = 1e-12 *->mrilvigDlHggfedlllllela.e.kpdlvlflGDlvdrgppslev r++ i+D+H + + ++ + d++l++GD++ g ps+ ah00336 61 TRFVCISDTHSRTD-------GIqMpYGDILLHTGDFTELGLPSEVK 100 llllfalklkapgpvylvrGNHDfdsgnsvl................... + +l + + + ++++GNH+ + ++ + + +++++++ ++ ++ ah00336 101 KFND-WLGNLPYEYKIVIAGNHELTFDKEFMadlvkqdyyrfpsvsklkp 149 ..........................................w.eflell ++++ + ++ + ++ ++++ ++ ++ +++++++++ + l ah00336 150 edfdnvqslltnsiylqdsevtvkgfriygapwtpwfngwgfNlPRGQSL 199 .lllla.lvdgkillvHgplspd................leellk.ngvd + ++ +++++il++Hgp+ + +++ +++ + + + l +++ +++ ah00336 200 lDKWNLiPEGIDILMTHGPPLGFrdwvpkelqrvgcvelLNTVQRrVRPK 249 lvirGHtHvp<-* l ++G +H+ ah00336 250 LHVFGGIHEV 259 PF00149.18.ls: domain 1 of 1, from 61 to 259: score 51.8, E = 2.2e-12 *->mrilvigDlHggfedlllllela.e.kpdlvlflGDlvdrgppslev r++ i+D+H + + ++ + d++l++GD++ g ps+ ah00336 61 TRFVCISDTHSRTD-------GIqMpYGDILLHTGDFTELGLPSEVK 100 llllfalklkapgpvylvrGNHDfdsgnsvl................... + +l + + + ++++GNH+ + ++ + + +++++++ ++ ++ ah00336 101 KFND-WLGNLPYEYKIVIAGNHELTFDKEFMadlvkqdyyrfpsvsklkp 149 ..........................................w.eflell ++++ + ++ + ++ ++++ ++ ++ +++++++++ + l ah00336 150 edfdnvqslltnsiylqdsevtvkgfriygapwtpwfngwgfNlPRGQSL 199 .lllla.lvdgkillvHgplspd................leellk.ngvd + ++ +++++il++Hgp+ + +++ +++ + + + l +++ +++ ah00336 200 lDKWNLiPEGIDILMTHGPPLGFrdwvpkelqrvgcvelLNTVQRrVRPK 249 lvirGHtHvp<-* l ++G +H+ ah00336 250 LHVFGGIHEV 259 //