# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oah00631.fasta.nr -Q ah00631.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ah00631, 231 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6819340 sequences Expectation_n fit: rho(ln(x))= 4.9896+/-0.000181; mu= 8.8596+/- 0.010 mean_var=62.1346+/-11.977, 0's: 42 Z-trim: 79 B-trim: 0 in 0/67 Lambda= 0.162708 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087912|dbj|BAD92403.1| major histocompatibili ( 231) 1531 367.5 8.8e-100 gi|188256|gb|AAA59783.1| cell surface glycoprotein ( 254) 1134 274.3 1.1e-71 gi|122206|sp|P01903|2DRA_HUMAN HLA class II histoc ( 254) 1134 274.3 1.1e-71 gi|119624034|gb|EAX03629.1| major histocompatibili ( 268) 1134 274.3 1.1e-71 gi|193227801|emb|CAP40290.1| MHC class II antigen ( 254) 1132 273.8 1.5e-71 gi|193227803|emb|CAP40291.1| MHC class II antigen ( 254) 1127 272.7 3.3e-71 gi|114606548|ref|XP_518384.2| PREDICTED: similar t ( 253) 1109 268.4 6.2e-70 gi|49640016|emb|CAE52535.1| MHC class II antigen [ ( 254) 1100 266.3 2.7e-69 gi|49640036|emb|CAE52545.1| MHC class II antigen [ ( 254) 1100 266.3 2.7e-69 gi|49640030|emb|CAE52542.1| MHC class II antigen [ ( 254) 1095 265.1 6.1e-69 gi|49640032|emb|CAE52543.1| MHC class II antigen [ ( 254) 1091 264.2 1.2e-68 gi|34395494|sp|Q30631|2DRA_MACMU HLA class II hist ( 254) 1091 264.2 1.2e-68 gi|125489020|gb|ABN42671.1| MHC class II antigen D ( 254) 1077 260.9 1.1e-67 gi|224343|prf||1102205B antigen HLA DRalpha ( 241) 1055 255.7 3.9e-66 gi|565245|gb|AAA99463.1| MHC class II DR alpha cha ( 254) 1029 249.7 2.8e-64 gi|2304945|gb|AAB65587.1| MHC class II antigen [Fe ( 254) 999 242.6 3.7e-62 gi|2304949|gb|AAB65589.1| MHC class II antigen [Fe ( 254) 989 240.3 1.9e-61 gi|529576|gb|AAA31394.1| integral membrane protein ( 255) 989 240.3 1.9e-61 gi|54649000|emb|CAH61723.1| MHC class II antigen D ( 251) 988 240.0 2.2e-61 gi|149732086|ref|XP_001494603.1| PREDICTED: MHC cl ( 254) 979 237.9 9.6e-61 gi|1633341|pdb|1SEB|A Chain A, Complex Of The Huma ( 181) 975 236.9 1.4e-60 gi|14719559|pdb|1HXY|A Chain A, Crystal Structure ( 182) 975 236.9 1.4e-60 gi|145579682|pdb|2IPK|A Chain A, Crystal Structure ( 183) 975 236.9 1.4e-60 gi|66361095|pdb|1YMM|A Chain A, TcrHLA-Dr2bMBP-Pep ( 191) 975 236.9 1.5e-60 gi|2914423|pdb|1AQD|A Chain A, Hla-Dr1 (Dra, Drb1 ( 192) 975 236.9 1.5e-60 gi|1335101|emb|CAA25076.1| HLA-DR alpha heavy chai ( 229) 975 236.9 1.7e-60 gi|42794350|gb|AAS45650.1| MHC class II antigen [Z ( 244) 973 236.5 2.5e-60 gi|42794346|gb|AAS45648.1| MHC class II antigen [Z ( 244) 973 236.5 2.5e-60 gi|42794356|gb|AAS45653.1| MHC class II antigen [Z ( 244) 973 236.5 2.5e-60 gi|164550|gb|AAA31074.1| MHC class II DR-alpha ( 253) 972 236.3 3e-60 gi|6729997|pdb|1BX2|A Chain A, Crystal Structure O ( 180) 970 235.7 3.1e-60 gi|52695640|pdb|1T5X|A Chain A, Hla-Dr1 In Complex ( 181) 970 235.7 3.2e-60 gi|207730|gb|AAA42366.1| MHC class II DR-alpha ( 254) 966 234.9 8e-60 gi|576090|pdb|1DLH|A Chain A, Crystal Structure Of ( 180) 964 234.3 8.3e-60 gi|42794348|gb|AAS45649.1| MHC class II antigen [Z ( 239) 964 234.4 1.1e-59 gi|42794352|gb|AAS45651.1| MHC class II antigen [Z ( 244) 964 234.4 1.1e-59 gi|207708|gb|AAA42355.1| MHC class II DR-alpha ( 254) 960 233.5 2.1e-59 gi|22219045|pdb|1KLG|A Chain A, Crystal Structure ( 177) 958 232.9 2.2e-59 gi|22219050|pdb|1KLU|A Chain A, Crystal Structure ( 179) 958 232.9 2.2e-59 gi|42794354|gb|AAS45652.1| MHC class II antigen [Z ( 244) 955 232.3 4.6e-59 gi|30909255|gb|AAP37552.1| MHC class II antigen [S ( 251) 955 232.3 4.7e-59 gi|189514164|gb|ACE07019.1| MHC class II antigen [ ( 252) 955 232.3 4.7e-59 gi|29124714|gb|AAO63763.1| MHC class II antigen [S ( 252) 955 232.3 4.7e-59 gi|3212400|pdb|1A6A|A Chain A, The Structure Of An ( 176) 952 231.5 5.8e-59 gi|47168716|pdb|1R5I|A Chain A, Crystal Structure ( 181) 951 231.3 6.9e-59 gi|207714|gb|AAA42358.1| MHC class II DR-alpha ( 252) 952 231.6 7.7e-59 gi|30909271|gb|AAP37560.1| MHC class II antigen [S ( 252) 951 231.3 9.1e-59 gi|164552|gb|AAA31075.1| MHC class II DR-alpha ( 252) 951 231.3 9.1e-59 gi|30909257|gb|AAP37553.1| MHC class II antigen [S ( 252) 951 231.3 9.1e-59 gi|29888125|gb|AAP03010.1| MHC class II antigen [S ( 252) 948 230.6 1.5e-58 >>gi|62087912|dbj|BAD92403.1| major histocompatibility c (231 aa) initn: 1531 init1: 1531 opt: 1531 Z-score: 1946.6 bits: 367.5 E(): 8.8e-100 Smith-Waterman score: 1531; 100.000% identity (100.000% similar) in 231 aa overlap (1-231:1-231) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 50 60 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 70 80 90 100 110 120 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 130 140 150 160 170 180 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV 190 200 210 220 230 >>gi|188256|gb|AAA59783.1| cell surface glycoprotein (254 aa) initn: 1125 init1: 1125 opt: 1134 Z-score: 1442.3 bits: 274.3 E(): 1.1e-71 Smith-Waterman score: 1134; 96.629% identity (97.191% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::: gi|188 MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|188 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|188 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|188 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|122206|sp|P01903|2DRA_HUMAN HLA class II histocompa (254 aa) initn: 1125 init1: 1125 opt: 1134 Z-score: 1442.3 bits: 274.3 E(): 1.1e-71 Smith-Waterman score: 1134; 96.629% identity (97.191% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::: gi|122 MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|122 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|119624034|gb|EAX03629.1| major histocompatibility c (268 aa) initn: 1125 init1: 1125 opt: 1134 Z-score: 1442.0 bits: 274.3 E(): 1.1e-71 Smith-Waterman score: 1134; 96.629% identity (97.191% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::: gi|119 MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|119 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|193227801|emb|CAP40290.1| MHC class II antigen [Pan (254 aa) initn: 1123 init1: 1123 opt: 1132 Z-score: 1439.8 bits: 273.8 E(): 1.5e-71 Smith-Waterman score: 1132; 95.506% identity (97.191% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS ::.::::::::::::::::::::::::::::::::::::::::: gi|193 MAVSGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|193 TPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|193 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|193227803|emb|CAP40291.1| MHC class II antigen [Pan (254 aa) initn: 1118 init1: 1118 opt: 1127 Z-score: 1433.5 bits: 272.7 E(): 3.3e-71 Smith-Waterman score: 1127; 94.944% identity (97.191% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS ::.:::::::::::::::.::::::::::::::::::::::::: gi|193 MAVSGVPVLGFFIIAVLMGAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|193 TPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|193 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|114606548|ref|XP_518384.2| PREDICTED: similar to HL (253 aa) initn: 949 init1: 949 opt: 1109 Z-score: 1410.6 bits: 268.4 E(): 6.2e-70 Smith-Waterman score: 1109; 94.382% identity (96.629% similar) in 178 aa overlap (17-194:1-177) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS ::.:::::::::::::::.::::::::: ::::::::::::::: gi|114 MAVSGVPVLGFFIIAVLMGAQESWAIKE-HVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|114 TPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|114 REDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|49640016|emb|CAE52535.1| MHC class II antigen [Maca (254 aa) initn: 1091 init1: 1091 opt: 1100 Z-score: 1399.2 bits: 266.3 E(): 2.7e-69 Smith-Waterman score: 1100; 93.820% identity (96.067% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::: gi|496 MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNN 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::: ::::::::::::.::::.::::.:::::::::::::::: gi|496 TPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|496 REDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|49640036|emb|CAE52545.1| MHC class II antigen [Maca (254 aa) initn: 1091 init1: 1091 opt: 1100 Z-score: 1399.2 bits: 266.3 E(): 2.7e-69 Smith-Waterman score: 1100; 93.820% identity (96.067% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS :::::::::::::::::::::::::::::::::::::::::::: gi|496 MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNN 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::: ::::::::::::.::::.::::.:::::::::::::::: gi|496 TPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|496 REDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 >>gi|49640030|emb|CAE52542.1| MHC class II antigen [Maca (254 aa) initn: 1086 init1: 1086 opt: 1095 Z-score: 1392.9 bits: 265.1 E(): 6.1e-69 Smith-Waterman score: 1095; 92.697% identity (96.067% similar) in 178 aa overlap (17-194:1-178) 10 20 30 40 50 60 ah0063 PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQS ::.::::::::::::.:::::::::::::::::::::::::::: gi|496 MAVSGVPVLGFFIIAMLMSAQESWAIKEEHVIIQAEFYLNPDQS 10 20 30 40 70 80 90 100 110 120 ah0063 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 GEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNN 50 60 70 80 90 100 130 140 150 160 170 180 ah0063 TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLP :::::::::::::::::::: ::::::::::::.::::.::::.:::::::::::::::: gi|496 TPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLP 110 120 130 140 150 160 190 200 210 220 230 ah0063 REDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV :::::: : . : gi|496 REDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGL 170 180 190 200 210 220 231 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 6 19:25:38 2008 done: Wed Aug 6 19:28:27 2008 Total Scan time: 672.090 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]