hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-19282810/chunk_1/iprscan-20080806-19282810.nocrc
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Query sequence: ah00631
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00407                                                  27.5    0.00025   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00407    1/1     143   199 ..     1    78 []    27.5  0.00025

Alignments of top-scoring domains:
SM00407: domain 1 of 1, from 143 to 199: score 27.5, E = 0.00025
                   *->katLvClvsgFyPpdItVeWlknGqqkeevtsgvkttdplkepsdgt
                      ++ L+C++++F Pp+++V+Wl+nG+   +vt gv++t +l+   d+ 
     ah00631   143    PNVLICFIDKFTPPVVNVTWLRNGK---PVTTGVSETVFLPR-EDHL 185  

                   YflsSyLtvsatwesgdvYtCqVtHegLtnp<-*
                   +   +  ++   +              Lt+p   
     ah00631   186 FLTPHLIHF---Y--------------LTSP    199  

//