hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080806/iprscan-20080806-19395668/chunk_1/iprscan-20080806-19395668.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ah00678 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00609.10.ls Diacylglycerol kinase accessory domain 205.4 1.2e-58 1 PF00609.10.fs Diacylglycerol kinase accessory domain 203.7 4e-58 1 PF00781.14.fs Diacylglycerol kinase catalytic domain (pres 164.5 3.6e-48 1 PF00781.14.ls Diacylglycerol kinase catalytic domain (pres 166.3 7e-47 1 PF00130.12.fs Phorbol esters/diacylglycerol binding domain 49.5 4.7e-13 2 PF00130.12.ls Phorbol esters/diacylglycerol binding domain 53.5 6.7e-13 2 PF00023.20.fs Ankyrin repeat 48.7 1.3e-12 2 PF00023.20.ls Ankyrin repeat 51.6 2.4e-12 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00130.12.fs 2/2 88 147 .. 1 55 [] 45.5 6.5e-12 PF00130.12.ls 2/2 88 147 .. 1 55 [] 47.4 4.4e-11 PF00781.14.ls 1/1 213 337 .. 1 152 [] 166.3 7e-47 PF00781.14.fs 1/1 213 337 .. 1 152 [] 164.5 3.6e-48 PF00609.10.fs 1/1 363 520 .. 1 190 [] 203.7 4e-58 PF00609.10.ls 1/1 363 520 .. 1 190 [] 205.4 1.2e-58 PF00023.20.fs 1/2 764 790 .. 1 27 [. 20.2 0.00012 PF00023.20.ls 1/2 764 796 .. 1 33 [] 21.1 0.0038 PF00023.20.ls 2/2 800 832 .. 1 33 [] 30.6 5.2e-06 PF00023.20.fs 2/2 800 832 .. 1 33 [] 28.6 5.5e-07 Alignments of top-scoring domains: PF00130.12.fs: domain 2 of 2, from 88 to 147: score 45.5, E = 6.5e-12 *->HhFvhrwtfkqptfCdhCgefl.....wgslgkqGlkCswCklnvHk Hh+vhr + +q ++C++Cg+ ++++ +++s++ + +CswCk +H+ ah00678 88 HHWVHR-R-RQEGKCKQCGKGFqqkfsFHSKEIVAISCSWCKQAFHN 132 r..ChekVppeCgcg<-* + +C++++++e++c+ ah00678 133 KvtCFMLHHIEEPCS 147 PF00130.12.ls: domain 2 of 2, from 88 to 147: score 47.4, E = 4.4e-11 *->HhFvhrwtfkqptfCdhCgefl.....wgslgkqGlkCswCklnvHk Hh+vhr + +q ++C++Cg+ ++++ +++s++ + +CswCk +H+ ah00678 88 HHWVHR-R-RQEGKCKQCGKGFqqkfsFHSKEIVAISCSWCKQAFHN 132 r..ChekVppeCgcg<-* + +C++++++e++c+ ah00678 133 KvtCFMLHHIEEPCS 147 PF00781.14.ls: domain 1 of 1, from 213 to 337: score 166.3, E = 7e-47 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv+vNPksGg++g kvl+ + +ln++qvf++ + +g ah00678 213 PLLVFVNPKSGGNQGT-------KVLQMFMWYLNPRQVFDLSQ--EG 250 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakaiRif p alel r++++ +++++GGDGTv+++++ L+++ + + ah00678 251 PKDALELYRKVPNL-----RILACGGDGTVGWILSILDELQLSP------ 289 prpplGiiPlGTgNdfAraLgipldpegAkaalaallailgqilcradvv +pp+G++PlGTgNd+Ar+L++++++ + +++ +il q++ + vv ah00678 290 -QPPVGVLPLGTGNDLARTLNWGGGYTD-----EPVSKILCQVE-DGTVV 332 vldrw<-* +ldrw ah00678 333 QLDRW 337 PF00781.14.fs: domain 1 of 1, from 213 to 337: score 164.5, E = 3.6e-48 *->kllvivNPksGggkgkkelayerkvleklrkalneaqvfeteeqtgg +llv+vNPksGg++g kvl+ + +ln++qvf++ + +g ah00678 213 PLLVFVNPKSGGNQGT-------KVLQMFMWYLNPRQVFDLSQ--EG 250 pahalelaralgdfkydvDlvvvaGGDGTvneVvngLagrddrakaiRif p alel r++++ +++++GGDGTv+++++ L+++ + + ah00678 251 PKDALELYRKVPNL-----RILACGGDGTVGWILSILDELQLSP------ 289 prpplGiiPlGTgNdfAraLgipldpegAkaalaallailgqilcradvv +pp+G++PlGTgNd+Ar+L++++++ + +++ +il q++ + vv ah00678 290 -QPPVGVLPLGTGNDLARTLNWGGGYTD-----EPVSKILCQVE-DGTVV 332 vldrw<-* +ldrw ah00678 333 QLDRW 337 PF00609.10.fs: domain 1 of 1, from 363 to 520: score 203.7, E = 4e-58 *->iINNYFSiGVDAsialrFHimREknPekFnSRmkNKlwYfefGtset + NNYFS G DA+ l+FH++RE+nPekFnSR +NK++Y + s++ ah00678 363 VFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGAAFSDF 409 lastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGGsnLWGe l +++++L+++v+++cdG +++ + +++ + I++LNIP y G+ +WG ah00678 410 LQRSSRDLSKHVKVVCDGTDLTPKIQELKFQCIVFLNIPRYCAGTMPWGN 459 skksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhmgqiyts + + ++ q++dDg +EV+G + ++ + ah00678 460 ---P-------------GDHHDFEPQRHDDGYIEVIGFT-MASLAAL--- 489 iqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<-* q+g + G Rl QC+ev ++t k++PMQVDGEP ah00678 490 -QVGGH-------GERLHQCREV----MLLTYKSIPMQVDGEP 520 PF00609.10.ls: domain 1 of 1, from 363 to 520: score 205.4, E = 1.2e-58 *->iINNYFSiGVDAsialrFHimREknPekFnSRmkNKlwYfefGtset + NNYFS G DA+ l+FH++RE+nPekFnSR +NK++Y + s++ ah00678 363 VFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGAAFSDF 409 lastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGGsnLWGe l +++++L+++v+++cdG +++ + +++ + I++LNIP y G+ +WG ah00678 410 LQRSSRDLSKHVKVVCDGTDLTPKIQELKFQCIVFLNIPRYCAGTMPWGN 459 skksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhmgqiyts + + ++ q++dDg +EV+G + ++ + ah00678 460 ---P-------------GDHHDFEPQRHDDGYIEVIGFT-MASLAAL--- 489 iqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<-* q+g + G Rl QC+ev ++t k++PMQVDGEP ah00678 490 -QVGGH-------GERLHQCREV----MLLTYKSIPMQVDGEP 520 PF00023.20.fs: domain 1 of 2, from 764 to 790: score 20.2, E = 0.00012 *->dGfTPLHlAalrgnlevvklLlsqGAd<-* d ++ LH+Aa+ gn e+vk+ l++G + ah00678 764 DHCSLLHYAAKTGNGEIVKYILDHGPS 790 PF00023.20.ls: domain 1 of 2, from 764 to 796: score 21.1, E = 0.0038 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* d ++ LH+Aa+ gn e+vk+ l++G + + ah00678 764 DHCSLLHYAAKTGNGEIVKYILDHGPSELLDMA 796 PF00023.20.ls: domain 2 of 2, from 800 to 832: score 30.6, E = 5.2e-06 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G+T+LH Aa+ n v++lL+++GA+l +d ah00678 800 TGETALHKAACQRNRAVCQLLVDAGASLRKTDS 832 PF00023.20.fs: domain 2 of 2, from 800 to 832: score 28.6, E = 5.5e-07 *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-* G+T+LH Aa+ n v++lL+++GA+l +d ah00678 800 TGETALHKAACQRNRAVCQLLVDAGASLRKTDS 832 //