hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-19461282/chunk_1/iprscan-20080806-19461282.nocrc
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Query sequence: ah00691
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00147                                                 347.3   9.8e-100   1
SM00325                                                 201.7    6.8e-56   1
SM00233                                                 112.4      5e-29   2
SM00229                                                  65.9    5.2e-15   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/2      60   168 ..     1    82 []    73.4  2.9e-17
SM00325     1/1     281   462 ..     1   211 []   201.7  6.8e-56
SM00233     2/2     494   623 ..     1    82 []    39.1  6.1e-07
SM00229     1/2     667   803 ..     1   172 []    46.9  2.6e-09
SM00229     2/2     902  1029 ..     1   172 []    18.9     0.01
SM00147     1/1    1055  1292 ..     1   261 []   347.3 9.8e-100

Alignments of top-scoring domains:
SM00233: domain 1 of 2, from 60 to 168: score 73.4, E = 2.9e-17
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk...kpkgsipLs
                       +++G+L+k+s+++++w+ ++f L  + L+y++s+++++p+g + L+
     ah00691    60    GTRKGYLSKRSsdNtKWQTKWFALLQNLLFYFESDsssRPSGLYLLE 106  

                   gcsvre.p................cFeivt.dr...tlllqAeseeeree
                   gc +++ p++++  + +++ ++ ++F++ +++++++ l+l++e++++++e
     ah00691   107 GCVCDRaPspkpalsakeplekqhYFTVNFsHEnqkALELRTEDAKDCDE 156  

                   Wvealqsaiaka<-*
                   Wv+a+  a+++    
     ah00691   157 WVAAIAHASYRT    168  

SM00325: domain 1 of 1, from 281 to 462: score 201.7, E = 6.8e-56
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      v++ +l+ E++YV++L+ilv++fl+pL++ a+s++ p++++d+v ++
     ah00691   281    VVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKK-PPITHDDVSSI 326  

                   FgpNieeiyefHrrFLdeLeerveewllskdlKsernsviedsgerigdv
                   F  N e+i  +H++F++ L++r++ w                ++ +++d+
     ah00691   327 FL-NSETIMFLHQIFYQGLKARISSW----------------PTLVLADL 359  

                   FlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeiesk
                   F+ l   +++++iY+e+++nh+++l++l++   +k+n +F k lk  e+k
     ah00691   360 FDIL---LPMLNIYQEFVRNHQYSLQILAH---CKQNRDFDKLLKHYEAK 403  

                   pncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLkk
                   p c+      +tLe++L  P+  +++Y+L L+ell htp++h +r+ L  
     ah00691   404 PDCE-----ERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDY 448  

                   AleaikelasqvNe<-*
                   A  +++el + +++   
     ah00691   449 AKSKLEELSRIMHD    462  

SM00233: domain 2 of 2, from 494 to 623: score 39.1, E = 6.1e-07
                   *->vikeGwLlkks................k.swkkryfvLfngvLlyyk
                      ++++G L +   + +++ ++++ ++ ++++  +r ++Lf++ L+++ 
     ah00691   494    FVRQGSLIQVPmsekgkitrgrlgslsLkKEGERQCFLFSKHLIICT 540  

                   sk.......kpkgsipLsgcsvre.p...................cFeiv
                     ++++ + ++ g+i+L +c++ e+p++ +++ ++++ + ++ +  + + 
     ah00691   541 RGsggklhlTKNGVISLIDCTLLEePesteeeakgsgqdidhldfKIGVE 590  

                   t.dr...tlllqAeseeereeWvealqsaiaka<-*
                    +d ++ t +l A+s +e+  W + + +++++    
     ah00691   591 PkDSppfTVILVASSRQEKAAWTSDISQCVDNI    623  

SM00229: domain 1 of 2, from 667 to 803: score 46.9, E = 2.6e-09
                   *->ckggliKgGtlekLiehLteardkgkvdlkaDptfvetFLlTYRsFi
                      ck+ +i+++++e+L+e+Lt+ r+        +++f++tFL+ YR+F+
     ah00691   667    CKVLQIRYASVERLLERLTDLRF-------LSIDFLNTFLHSYRVFT 706  

                   ttqeLlqkLldrYnaippeivsrSlelkateaseglsfedysknaipvgf
                   t   +l+kL+ +Y+++ + i++rSlel          f  +         
     ah00691   707 TAIVVLDKLITIYKKPISAIPARSLEL---------LFASG--------- 738  

                   aetdiivkekvnprriqnrVlnilrlWvenywedFeedpklnlfLeelfl
                   ++ +    e+  ++r +++        +++ +    +  ++ ++ ++l l
     ah00691   739 QNNKLLYGEPPKSPRATRK--------FSSPPPLSITKTSSPSRRRKLSL 780  

                   elvedkkdkgpglekslanilerls<-*
                   +    +   g +l   ++  + +++   
     ah00691   781 NIPIIT--GGKALDLAALSCNSNGY    803  

SM00229: domain 2 of 2, from 902 to 1029: score 18.9, E = 0.01
                   *->ckggliKgGtlekLiehLteardkgkvdlkaDptfvetFLlTYRsFi
                       + g+++  t ++ +    +a+++      a+ + ++t         
     ah00691   902    YNNGVVM--TSCRELDNNRSALSA------ASAFAIAT--------A 932  

                   ttqeLlqkLldrYnaippeivsrSlelkateaseglsfedysknaipvgf
                     +e    + ++ +    +                             gf
     ah00691   933 GANEGTPNKEKYRRMSLAS----------------------------AGF 954  

                   .aetdiivkekvnprriqnrVlnilrlWvenywedFeedpklnlfLeelf
                   + ++++ +ke+v++r  +nrVln+lr+Wv+++++dFe++++l+  +   f
     ah00691   955 pPDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFETNDELKCKVIG-F 1003 

                   lelvedkkdkgpglekslanilerls<-*
                   le v+++++ +++++k +ani++ l+   
     ah00691  1004 LEEVMHDPELLTQERKAAANIIRTLT    1029 

SM00147: domain 1 of 1, from 1055 to 1292: score 347.3, E = 9.8e-100
                   *->lllldpeelAeQLTlldfelFrkIepsEllgsvwgkrskkspsplap
                      + ++++ e+AeQLTlld+ +F+kI ++E+ g+ w+k +k++++p   
     ah00691  1055    FENHSALEIAEQLTLLDHLVFKKIPYEEFFGQGWMKLEKNERTP--- 1098 

                   qnleafierfNevsnwVateIlkqttlkpkkRaevlskFIkVAkhcreLn
                     +++++++fN +sn +a+eI++ ++     R+  ++k++ VA+ cr+L+
     ah00691  1099 -YIMKTTKHFNDISNLIASEIIRNED--INARVSAIEKWVAVADICRCLH 1145 

                   NFnSlmAIvsaLssspIsRLkkTWeklsskykklfeeLeelldpserNfk
                   N+n +++I+s ++ s+I RLkkTW k+s+++k l ++L++l++++ ++fk
     ah00691  1146 NYNAVLEITSSMNRSAIFRLKKTWLKVSKQTKALIDKLQKLVSSE-GRFK 1194 

                   nYReaLkscnkspnvqppcvPflGvyLkDLtfidegnpdflengtkglvN
                   n ReaLk+c       ppcvP+lG+yL+DL+fi+eg+p+++e+   glvN
     ah00691  1195 NLREALKNCD------PPCVPYLGMYLTDLAFIEEGTPNYTED---GLVN 1235 

                   FeKrrkiakilreirqlqsacqpynlkpnrndiqellrasrplevlpeee
                   F+K+r+i++i+reirq+q+  + y ++++ ++ q+ll++   + v++ee 
     ah00691  1236 FSKMRMISHIIREIRQFQQ--TAYKIEHQAKVTQYLLDQ---SFVMDEE- 1279 

                   delyelSlriEPrv<-*
                     lye SlriEP+    
     ah00691  1280 -SLYESSLRIEPKL    1292 

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