# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oah01423.fasta.nr -Q ah01423.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ah01423, 282 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6820634 sequences Expectation_n fit: rho(ln(x))= 4.8624+/-0.000182; mu= 11.0141+/- 0.010 mean_var=65.0019+/-12.679, 0's: 41 Z-trim: 77 B-trim: 0 in 0/65 Lambda= 0.159078 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087928|dbj|BAD92411.1| actin-related protein ( 282) 1917 448.2 6.3e-124 gi|4090868|gb|AAC98904.1| actin-related protein 3- ( 418) 1856 434.4 1.4e-119 gi|149634813|ref|XP_001513007.1| PREDICTED: simila ( 482) 1851 433.3 3.5e-119 gi|73979029|ref|XP_532772.2| PREDICTED: similar to ( 528) 1849 432.8 5.1e-119 gi|149707046|ref|XP_001495828.1| PREDICTED: ARP3 a ( 443) 1845 431.9 8.4e-119 gi|62646620|ref|XP_342612.2| PREDICTED: similar to ( 418) 1842 431.2 1.3e-118 gi|148671124|gb|EDL03071.1| ARP3 actin-related pro ( 330) 1838 430.2 2e-118 gi|126341250|ref|XP_001372253.1| PREDICTED: simila ( 438) 1839 430.5 2.2e-118 gi|81910611|sp|Q641P0.1|ARP3B_MOUSE Actin-related ( 418) 1838 430.2 2.5e-118 gi|31418623|gb|AAH53106.1| Actr3b protein [Mus mus ( 428) 1838 430.2 2.5e-118 gi|50732241|ref|XP_418544.1| PREDICTED: similar to ( 418) 1834 429.3 4.6e-118 gi|119891740|ref|XP_873511.2| PREDICTED: similar t ( 610) 1816 425.3 1.1e-116 gi|126326219|ref|XP_001369440.1| PREDICTED: simila ( 427) 1718 402.7 4.9e-110 gi|82217061|sp|Q90WD0.1|ARP3_CHICK Actin-related p ( 418) 1716 402.2 6.6e-110 gi|47117646|sp|P61157.3|ARP3_BOVIN Actin-related p ( 418) 1714 401.8 9.1e-110 gi|161728791|dbj|BAF94209.1| actin-related protein ( 417) 1713 401.6 1.1e-109 gi|161728789|dbj|BAF94208.1| actin-related protein ( 418) 1713 401.6 1.1e-109 gi|47116573|sp|Q99JY9.3|ARP3_MOUSE Actin-related p ( 418) 1713 401.6 1.1e-109 gi|194222174|ref|XP_001488849.2| PREDICTED: actin- ( 522) 1714 401.9 1.1e-109 gi|73984196|ref|XP_853309.1| PREDICTED: similar to ( 565) 1714 401.9 1.1e-109 gi|74220060|dbj|BAE40607.1| unnamed protein produc ( 418) 1711 401.1 1.5e-109 gi|62088286|dbj|BAD92590.1| ARP3 actin-related pro ( 369) 1708 400.4 2.1e-109 gi|74198200|dbj|BAE35272.1| unnamed protein produc ( 418) 1706 399.9 3.2e-109 gi|47219197|emb|CAG11215.1| unnamed protein produc ( 418) 1705 399.7 3.8e-109 gi|115304856|gb|AAI23583.1| ARP3 actin-related pro ( 418) 1705 399.7 3.8e-109 gi|39849985|gb|AAH64225.1| ARP3 actin-related prot ( 418) 1705 399.7 3.8e-109 gi|46403261|gb|AAS92650.1| ARP3 actin-related prot ( 418) 1703 399.3 5.2e-109 gi|6707667|sp|O73723.1|ARP3_FUGRU Actin-related pr ( 418) 1703 399.3 5.2e-109 gi|74214405|dbj|BAE40438.1| unnamed protein produc ( 418) 1703 399.3 5.2e-109 gi|29126978|gb|AAH47983.1| Actr3-prov protein [Xen ( 418) 1702 399.0 6.1e-109 gi|12835802|dbj|BAB23368.1| unnamed protein produc ( 418) 1701 398.8 7.2e-109 gi|21634400|gb|AAM63548.1| Arp3 [Danio rerio] ( 418) 1672 392.1 7.2e-107 gi|119640050|gb|ABL85460.1| actin related protein ( 417) 1648 386.6 3.3e-105 gi|169172022|ref|XP_001714297.1| PREDICTED: simila ( 265) 1635 383.5 1.8e-104 gi|33150544|gb|AAP97150.1|AF086920_1 actin related ( 402) 1633 383.2 3.5e-104 gi|109472893|ref|XP_001058018.1| PREDICTED: simila ( 350) 1627 381.8 8.1e-104 gi|149031408|gb|EDL86398.1| similar to actin-relat ( 248) 1621 380.3 1.6e-103 gi|114616879|ref|XP_001143822.1| PREDICTED: actin- ( 413) 1623 380.9 1.7e-103 gi|156220961|gb|EDO41822.1| predicted protein [Nem ( 418) 1619 380.0 3.3e-103 gi|91078924|ref|XP_973781.1| PREDICTED: similar to ( 418) 1599 375.4 8e-102 gi|167880727|gb|EDS44110.1| actin [Culex quinquefa ( 418) 1599 375.4 8e-102 gi|190624863|gb|EDV40387.1| GF10484 [Drosophila an ( 418) 1598 375.2 9.4e-102 gi|167878819|gb|EDS42202.1| actin [Culex quinquefa ( 418) 1596 374.7 1.3e-101 gi|193919728|gb|EDW18595.1| GI12000 [Drosophila mo ( 418) 1591 373.6 2.8e-101 gi|190653156|gb|EDV50399.1| GG14922 [Drosophila er ( 418) 1591 373.6 2.8e-101 gi|54642565|gb|EAL31312.1| GA20439-PA [Drosophila ( 418) 1589 373.1 3.9e-101 gi|30581042|sp|P32392.3|ARP3_DROME Actin-related p ( 418) 1588 372.9 4.6e-101 gi|30176644|gb|EAA09440.2| AGAP005110-PA [Anophele ( 418) 1587 372.6 5.4e-101 gi|194154304|gb|EDW69488.1| GJ13271 [Drosophila vi ( 418) 1586 372.4 6.3e-101 gi|108871296|gb|EAT35521.1| actin [Aedes aegypti] ( 418) 1580 371.0 1.6e-100 >>gi|62087928|dbj|BAD92411.1| actin-related protein 3-be (282 aa) initn: 1917 init1: 1917 opt: 1917 Z-score: 2380.0 bits: 448.2 E(): 6.3e-124 Smith-Waterman score: 1917; 100.000% identity (100.000% similar) in 282 aa overlap (1-282:1-282) 10 20 30 40 50 60 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIA 10 20 30 40 50 60 70 80 90 100 110 120 ah0142 GRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQY 70 80 90 100 110 120 130 140 150 160 170 180 ah0142 TGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPIDVRRPLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFMESISDVVDEVIQNCPIDVRRPLY 130 140 150 160 170 180 190 200 210 220 230 240 ah0142 KNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPVEVQVVTHHMQRYA 190 200 210 220 230 240 250 260 270 280 ah0142 VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS :::::::::::::::::::::::::::::::::::::::::: gi|620 VWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVFGVMS 250 260 270 280 >>gi|4090868|gb|AAC98904.1| actin-related protein 3-beta (418 aa) initn: 1856 init1: 1856 opt: 1856 Z-score: 2302.0 bits: 434.4 E(): 1.4e-119 Smith-Waterman score: 1856; 99.635% identity (100.000% similar) in 274 aa overlap (9-282:145-418) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|409 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 120 130 140 150 160 170 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 180 190 200 210 220 230 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME 240 250 260 270 280 290 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS 300 310 320 330 340 350 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 360 370 380 390 400 410 280 ah0142 GVMS :::: gi|409 GVMS >>gi|149634813|ref|XP_001513007.1| PREDICTED: similar to (482 aa) initn: 1851 init1: 1851 opt: 1851 Z-score: 2294.9 bits: 433.3 E(): 3.5e-119 Smith-Waterman score: 1851; 98.905% identity (100.000% similar) in 274 aa overlap (9-282:209-482) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|149 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 180 190 200 210 220 230 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 240 250 260 270 280 290 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME 300 310 320 330 340 350 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSEELS 360 370 380 390 400 410 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 420 430 440 450 460 470 280 ah0142 GVMS :::: gi|149 GVMS 480 >>gi|73979029|ref|XP_532772.2| PREDICTED: similar to act (528 aa) initn: 1849 init1: 1849 opt: 1849 Z-score: 2291.9 bits: 432.8 E(): 5.1e-119 Smith-Waterman score: 1849; 98.540% identity (100.000% similar) in 274 aa overlap (9-282:255-528) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|739 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 230 240 250 260 270 280 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 THAIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 290 300 310 320 330 340 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|739 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 350 360 370 380 390 400 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS 410 420 430 440 450 460 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|739 GGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 470 480 490 500 510 520 280 ah0142 GVMS :::: gi|739 GVMS >>gi|149707046|ref|XP_001495828.1| PREDICTED: ARP3 actin (443 aa) initn: 1845 init1: 1845 opt: 1845 Z-score: 2288.0 bits: 431.9 E(): 8.4e-119 Smith-Waterman score: 1845; 98.175% identity (100.000% similar) in 274 aa overlap (9-282:170-443) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|149 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 140 150 160 170 180 190 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 THAIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 200 210 220 230 240 250 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|149 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 260 270 280 290 300 310 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|149 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSEELS 320 330 340 350 360 370 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|149 GGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 380 390 400 410 420 430 280 ah0142 GVMS :::: gi|149 GVMS 440 >>gi|62646620|ref|XP_342612.2| PREDICTED: similar to ARP (418 aa) initn: 1842 init1: 1842 opt: 1842 Z-score: 2284.6 bits: 431.2 E(): 1.3e-118 Smith-Waterman score: 1842; 97.445% identity (100.000% similar) in 274 aa overlap (9-282:145-418) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|626 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 120 130 140 150 160 170 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|626 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 180 190 200 210 220 230 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME ::::::::::::::::::::::::::::::.::.:::::::::::::::::::::::::: gi|626 CPDIVKEFAKYDVDPRKWIKQYTGINAINQRKFIIDVGYERFLGPEIFFHPEFANPDFME 240 250 260 270 280 290 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS ::::::::::::::::::::::::.::::::::::::::::::::::::::::.::.::: gi|626 SISDVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELS 300 310 320 330 340 350 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|626 GGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 360 370 380 390 400 410 280 ah0142 GVMS :::: gi|626 GVMS >>gi|148671124|gb|EDL03071.1| ARP3 actin-related protein (330 aa) initn: 1838 init1: 1838 opt: 1838 Z-score: 2281.1 bits: 430.2 E(): 2e-118 Smith-Waterman score: 1838; 97.810% identity (100.000% similar) in 274 aa overlap (9-282:57-330) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|148 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 30 40 50 60 70 80 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 90 100 110 120 130 140 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::.:::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|148 CPDIVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 150 160 170 180 190 200 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::.:::::::::::::::::::::::::::::::::::::::::.::.::: gi|148 SISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELS 210 220 230 240 250 260 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 270 280 290 300 310 320 280 ah0142 GVMS :::: gi|148 GVMS 330 >>gi|126341250|ref|XP_001372253.1| PREDICTED: similar to (438 aa) initn: 1839 init1: 1839 opt: 1839 Z-score: 2280.6 bits: 430.5 E(): 2.2e-118 Smith-Waterman score: 1839; 98.175% identity (99.635% similar) in 274 aa overlap (9-282:165-438) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|126 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 140 150 160 170 180 190 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 200 210 220 230 240 250 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::::::::::: ::::::::::::::::::.:::::::::::::::::::::::::: gi|126 CPDIVKEFAKYDVDARKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 260 270 280 290 300 310 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|126 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSEELS 320 330 340 350 360 370 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|126 GGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 380 390 400 410 420 430 280 ah0142 GVMS :::: gi|126 GVMS >>gi|81910611|sp|Q641P0.1|ARP3B_MOUSE Actin-related prot (418 aa) initn: 1838 init1: 1838 opt: 1838 Z-score: 2279.7 bits: 430.2 E(): 2.5e-118 Smith-Waterman score: 1838; 97.810% identity (100.000% similar) in 274 aa overlap (9-282:145-418) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|819 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 120 130 140 150 160 170 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 180 190 200 210 220 230 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::.:::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|819 CPDIVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 240 250 260 270 280 290 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::.:::::::::::::::::::::::::::::::::::::::::.::.::: gi|819 SISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELS 300 310 320 330 340 350 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 360 370 380 390 400 410 280 ah0142 GVMS :::: gi|819 GVMS >>gi|31418623|gb|AAH53106.1| Actr3b protein [Mus musculu (428 aa) initn: 1838 init1: 1838 opt: 1838 Z-score: 2279.5 bits: 430.2 E(): 2.5e-118 Smith-Waterman score: 1838; 97.810% identity (100.000% similar) in 274 aa overlap (9-282:155-428) 10 20 30 ah0142 RTRTLHCSSVLALAASWTSRQVGERTLTGIVIDSGDGV .::::::::::::::::::::::::::::: gi|314 PPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGV 130 140 150 160 170 180 40 50 60 70 80 90 ah0142 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 THVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 190 200 210 220 230 240 100 110 120 130 140 150 ah0142 CPDIVKEFAKYDVDPRKWIKQYTGINAINQKKFVIDVGYERFLGPEIFFHPEFANPDFME :::::.:::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|314 CPDIVREFAKYDVDPRKWIKQYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDFME 250 260 270 280 290 300 160 170 180 190 200 210 ah0142 SISDVVDEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELS :::::::::::.:::::::::::::::::::::::::::::::::::::::::.::.::: gi|314 SISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELS 310 320 330 340 350 360 220 230 240 250 260 270 ah0142 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|314 GGRIKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHNPVF 370 380 390 400 410 420 280 ah0142 GVMS :::: gi|314 GVMS 282 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 6 20:12:56 2008 done: Wed Aug 6 20:15:34 2008 Total Scan time: 724.850 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]