hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-20210936/chunk_1/iprscan-20080806-20210936.nocrc
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Query sequence: ah01527
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00079                                                 452.9   1.6e-131   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00079    1/1     418   787 ..     1   296 []   452.9 1.6e-131

Alignments of top-scoring domains:
SM00079: domain 1 of 1, from 418 to 787: score 452.9, E = 1.6e-131
                   *->tlkVttrilekPfvmfkknpeglkiDPitgnkcfeGyCIDLlealak
                      tl+Vtt ile+P++m+k+n++++     +gn+++eG+C+D+l++la+
     ah01527   418    TLVVTT-ILENPYLMLKGNHQEM-----EGNDRYEGFCVDMLKELAE 458  

                   ilgFtYelelVpDGkYGskdantgnWnGmIgeLirgeADmAVapLTItae
                   il F+Y+++lV+DG YG ++an g+W+Gm+geLi+++AD+AVa LTItae
     ah01527   459 ILRFNYKIRLVGDGVYGVPEAN-GTWTGMVGELIARKADLAVAGLTITAE 507  

                   RervVDFTkPFmelGIsILvkkpdkqksslfsFLePfs............
                   Re+v+DF+kPFm+lGIsIL++++ ++k++ fsFL+Pfs++          
     ah01527   508 REKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSpgvwlfmllayl 557  

                   ..................................................
                     +       + ++ +  ++++  +++ +   ++ + +++   + ++  +
     ah01527   558 avscvlflvarltpyewysphpcaqgrcnllvnqyslgnslwfpvggfmq 607  

                   ...............................kkLAAfLTvermespIssv
                   ++++  ++  +++  ++     +    ++ + +LAAfLTv+rm  pI+sv
     ah01527   608 qgstiapralstrcvsgvwwaftliiissytANLAAFLTVQRMDVPIESV 657  

                   eDLakrnpQtkieyGTvrgssTeefFkrpSkiptysrmwryMssrsksps
                   +DLa+   Qt ieyGT++g+s+++fF++ S+++ty+rmw+yM  +sk+ps
     ah01527   658 DDLAD---QTAIEYGTIHGGSSMTFFQN-SRYQTYQRMWNYM--YSKQPS 701  

                   vfvkslseGvqrvlnskGnYAFlmEstyleYeasrDpnCdYKLvtvGevf
                   vfvks++eG++rvlns  nYAFl+Est++eY+ +r  nC+  L+++G+++
     ah01527   702 VFVKSTEEGIARVLNS--NYAFLLESTMNEYYRQR--NCN--LTQIGGLL 745  

                   gskGYGIAlpkgSPlrdklSrAILkLsEsGeLekLknKWwkk<-*
                   ++kGYGI++p gS +rd +++AIL+L+E+++Le+Lk+KWw++   
     ah01527   746 DTKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEG    787  

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