# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oah01984.fasta.nr -Q ah01984.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ah01984, 385 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6811376 sequences Expectation_n fit: rho(ln(x))= 6.0432+/-0.000198; mu= 7.3547+/- 0.011 mean_var=103.0174+/-19.820, 0's: 45 Z-trim: 134 B-trim: 0 in 0/67 Lambda= 0.126363 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62087934|dbj|BAD92414.1| paired box gene 6 isof ( 385) 2619 487.6 1.7e-135 gi|109106899|ref|XP_001085217.1| PREDICTED: simila ( 377) 2560 476.8 2.9e-132 gi|26389393|dbj|BAC25729.1| unnamed protein produc ( 422) 2556 476.1 5.3e-132 gi|6174889|sp|P26367|PAX6_HUMAN Paired box protein ( 422) 2556 476.1 5.3e-132 gi|119588639|gb|EAW68233.1| paired box gene 6 (ani ( 456) 2556 476.1 5.6e-132 gi|119390857|sp|Q1LZF1|PAX6_BOVIN Paired box prote ( 422) 2551 475.2 9.9e-132 gi|77547035|gb|ABA90484.1| paired box protein PAX6 ( 422) 2548 474.6 1.4e-131 gi|193786700|dbj|BAG52023.1| unnamed protein produ ( 422) 2547 474.5 1.6e-131 gi|51704214|sp|P63016|PAX6_RAT Paired box protein ( 422) 2546 474.3 1.9e-131 gi|189353|gb|AAA59962.1| oculorhombin gi|18935 ( 422) 2546 474.3 1.9e-131 gi|1405744|emb|CAA45379.1| Pax-6 (paired box conta ( 436) 2546 474.3 1.9e-131 gi|48842893|emb|CAG38087.1| paired box gene 6 (ani ( 436) 2546 474.3 1.9e-131 gi|149022827|gb|EDL79721.1| paired box gene 6, iso ( 456) 2546 474.3 2e-131 gi|119588642|gb|EAW68236.1| paired box gene 6 (ani ( 470) 2546 474.3 2e-131 gi|148695801|gb|EDL27748.1| paired box gene 6, iso ( 499) 2546 474.3 2.1e-131 gi|134289886|gb|ABO70134.1| PAX6 [Canis familiaris ( 436) 2541 473.4 3.6e-131 gi|115501601|gb|ABI98848.1| paired box 6 transcrip ( 422) 2540 473.2 4e-131 gi|18138028|emb|CAC80516.1| paired box protein [Mu ( 436) 2540 473.2 4.1e-131 gi|77547037|gb|ABA90485.1| paired box protein PAX6 ( 436) 2538 472.8 5.3e-131 gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a ( 436) 2536 472.5 6.8e-131 gi|149022829|gb|EDL79723.1| paired box gene 6, iso ( 470) 2536 472.5 7.2e-131 gi|34364871|emb|CAE45868.1| hypothetical protein [ ( 436) 2535 472.3 7.7e-131 gi|383296|prf||1902328A PAX6 gene ( 422) 2533 471.9 9.6e-131 gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus ga ( 436) 2530 471.4 1.4e-130 gi|42592306|emb|CAF29075.1| putative pax6 isoform ( 436) 2525 470.5 2.7e-130 gi|151564048|gb|ABS17534.1| PAX6 [Bufo raddei] ( 422) 2515 468.6 9.4e-130 gi|49522632|gb|AAH75551.1| Paired box 6 [Xenopus t ( 424) 2513 468.3 1.2e-129 gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenop ( 453) 2492 464.5 1.8e-128 gi|8132383|gb|AAF73271.1|AF154555_1 paired domain ( 422) 2489 463.9 2.5e-128 gi|1352720|sp|P47238|PAX6_COTJA Paired box protein ( 416) 2485 463.2 4.1e-128 gi|5758939|gb|AAD50903.1|AF169414_1 paired-box tra ( 419) 2479 462.1 8.8e-128 gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis] ( 422) 2475 461.3 1.5e-127 gi|115501599|gb|ABI98847.1| paired box 6 transcrip ( 430) 2475 461.3 1.5e-127 gi|1685047|gb|AAB36681.1| paired-type homeodomain ( 453) 2475 461.4 1.6e-127 gi|2495315|sp|P55864|PAX6_XENLA Paired box protein ( 422) 2474 461.2 1.7e-127 gi|2696972|dbj|BAA24025.1| PAX6 SL [Cynops pyrrhog ( 438) 2472 460.8 2.2e-127 gi|5758935|gb|AAD50901.1|AF169412_1 paired-box tra ( 433) 2469 460.3 3.2e-127 gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhog ( 452) 2462 459.0 8e-127 gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xen ( 421) 2445 455.9 6.5e-126 gi|228153|prf||1717390A pax gene ( 374) 2417 450.7 2e-124 gi|129651|sp|P26630|PAX6_BRARE Paired box protein ( 437) 2417 450.8 2.3e-124 gi|62547|emb|CAA44867.1| pax-6 [Danio rerio] g ( 451) 2407 449.0 8.3e-124 gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax ( 437) 2393 446.4 4.8e-123 gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax ( 433) 2383 444.6 1.7e-122 gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax ( 441) 2383 444.6 1.7e-122 gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax ( 459) 2383 444.6 1.8e-122 gi|3914281|sp|O73917|PAX6_ORYLA Paired box protein ( 437) 2375 443.1 4.6e-122 gi|3779238|gb|AAC96095.1| Pax-family transcription ( 437) 2369 442.0 9.9e-122 gi|47218729|emb|CAG05701.1| unnamed protein produc ( 417) 2358 440.0 3.8e-121 gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis ( 346) 2330 434.8 1.1e-119 >>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform (385 aa) initn: 2619 init1: 2619 opt: 2619 Z-score: 2587.7 bits: 487.6 E(): 1.7e-135 Smith-Waterman score: 2619; 100.000% identity (100.000% similar) in 385 aa overlap (1-385:1-385) 10 20 30 40 50 60 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSI 10 20 30 40 50 60 70 80 90 100 110 120 ah0198 FAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWG 70 80 90 100 110 120 130 140 150 160 170 180 ah0198 TRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSF 130 140 150 160 170 180 190 200 210 220 230 240 ah0198 TQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQ 190 200 210 220 230 240 250 260 270 280 290 300 ah0198 ASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTM 250 260 270 280 290 300 310 320 330 340 350 360 ah0198 ANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLI 310 320 330 340 350 360 370 380 ah0198 SPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::: gi|620 SPGVSVPVQVPGSEPDMSQYWPRLQ 370 380 >>gi|109106899|ref|XP_001085217.1| PREDICTED: similar to (377 aa) initn: 2560 init1: 2560 opt: 2560 Z-score: 2529.7 bits: 476.8 E(): 2.9e-132 Smith-Waterman score: 2560; 100.000% identity (100.000% similar) in 377 aa overlap (9-385:1-377) 10 20 30 40 50 60 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSI 10 20 30 40 50 70 80 90 100 110 120 ah0198 FAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWG 60 70 80 90 100 110 130 140 150 160 170 180 ah0198 TRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSF 120 130 140 150 160 170 190 200 210 220 230 240 ah0198 TQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQ 180 190 200 210 220 230 250 260 270 280 290 300 ah0198 ASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTM 240 250 260 270 280 290 310 320 330 340 350 360 ah0198 ANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLI 300 310 320 330 340 350 370 380 ah0198 SPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::: gi|109 SPGVSVPVQVPGSEPDMSQYWPRLQ 360 370 >>gi|26389393|dbj|BAC25729.1| unnamed protein product [M (422 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 2525.1 bits: 476.1 E(): 5.3e-132 Smith-Waterman score: 2556; 99.735% identity (100.000% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|263 VNERPLPDSTRQKIVQLAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|263 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|6174889|sp|P26367|PAX6_HUMAN Paired box protein Pax (422 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 2525.1 bits: 476.1 E(): 5.3e-132 Smith-Waterman score: 2556; 99.735% identity (100.000% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|617 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|617 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridi (456 aa) initn: 2556 init1: 2556 opt: 2556 Z-score: 2524.6 bits: 476.1 E(): 5.6e-132 Smith-Waterman score: 2556; 99.735% identity (100.000% similar) in 377 aa overlap (9-385:80-456) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|119 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 50 60 70 80 90 100 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 110 120 130 140 150 160 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 170 180 190 200 210 220 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 230 240 250 260 270 280 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 290 300 310 320 330 340 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 350 360 370 380 390 400 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 410 420 430 440 450 >>gi|119390857|sp|Q1LZF1|PAX6_BOVIN Paired box protein P (422 aa) initn: 2551 init1: 2551 opt: 2551 Z-score: 2520.1 bits: 475.2 E(): 9.9e-132 Smith-Waterman score: 2551; 99.469% identity (100.000% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|119 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ :::::::::::::::.::::::::::::::::::::::::::::::: gi|119 HMQTHMNSQPMGTSGATSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|77547035|gb|ABA90484.1| paired box protein PAX6 iso (422 aa) initn: 2548 init1: 2548 opt: 2548 Z-score: 2517.2 bits: 474.6 E(): 1.4e-131 Smith-Waterman score: 2548; 99.469% identity (99.735% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|775 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|775 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|775 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQPQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|775 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|775 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|775 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|775 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|193786700|dbj|BAG52023.1| unnamed protein product [ (422 aa) initn: 2547 init1: 2547 opt: 2547 Z-score: 2516.2 bits: 474.5 E(): 1.6e-131 Smith-Waterman score: 2547; 99.469% identity (99.735% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|193 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|193 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYGTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|193 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|51704214|sp|P63016|PAX6_RAT Paired box protein Pax- (422 aa) initn: 2546 init1: 2546 opt: 2546 Z-score: 2515.2 bits: 474.3 E(): 1.9e-131 Smith-Waterman score: 2546; 99.469% identity (99.735% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|517 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|517 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGQGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|517 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 >>gi|189353|gb|AAA59962.1| oculorhombin gi|189354|gb (422 aa) initn: 2546 init1: 2546 opt: 2546 Z-score: 2515.2 bits: 474.3 E(): 1.9e-131 Smith-Waterman score: 2546; 99.469% identity (99.735% similar) in 377 aa overlap (9-385:46-422) 10 20 30 ah0198 CGFLSTSPMQVSNGCVSKILGRYYETGSIRPRAIGGSK .::::::::::::::::::::::::::::: gi|189 VNGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSK 20 30 40 50 60 70 40 50 60 70 80 90 ah0198 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 PRVATPEVVSKIAQYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQ 80 90 100 110 120 130 100 110 120 130 140 150 ah0198 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 QMGADGMYDKLRMLNGQTGSWGTRPGWYPGTSVPGQPTQDGCQQQEGGGENTNSISSNGE 140 150 160 170 180 190 160 170 180 190 200 210 ah0198 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 DSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 200 210 220 230 240 250 220 230 240 250 260 270 ah0198 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 VWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPVSSFTSGSML 260 270 280 290 300 310 280 290 300 310 320 330 ah0198 GRTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP : :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|189 GLTDTALTNTYSALPPMPSFTMANNLPMQPPVPSQTSSYSCMLPTSPSVNGRSYDTYTPP 320 330 340 350 360 370 340 350 360 370 380 ah0198 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ ::::::::::::::::::::::::::::::::::::::::::::::: gi|189 HMQTHMNSQPMGTSGTTSTGLISPGVSVPVQVPGSEPDMSQYWPRLQ 380 390 400 410 420 385 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 6 20:42:21 2008 done: Wed Aug 6 20:44:49 2008 Total Scan time: 795.960 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]