hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20100311/iprscan-20100311-17383009/chunk_1/iprscan-20100311-17383009.nocrc
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Query sequence: ah03136
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00266.9.fs Aminotransferase class-V                    102.4    1.3e-27   1
PF00266.9.ls Aminotransferase class-V                   -155.2    0.00015   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00266.9.ls   1/1      12   235 .]     1   399 []  -155.2  0.00015
PF00266.9.fs   1/1      91   226 ..   129   274 ..   102.4  1.3e-27

Alignments of top-scoring domains:
PF00266.9.ls: domain 1 of 1, from 12 to 235: score -155.2, E = 0.00015
                   *->iYLDsAATtqkPqaVldAlqeyYtdyngNvHRVmgvHtlgaeataay
                               +kP+    + ++             ++ + g       
     ah03136    12    ---------RKPD---LKGTHRWA----------PQPSEGG------ 30   

                   EeaRekVAefinApsdeeIiFTsGtTegaiNLvAnslgrsrlkpGDeIiv
                              +Ap+ + +    G+T+  ++ +A ++     ++ ++ + 
     ah03136    31 -----------QAPFHYFL----GGTR--LHPAAPGAPGG--RTSGSLLN 61   

                   temEHhANlvPWqelakrtGatvrvipvdd.dGlldvldeleklitprTk
                     m     +    +++ +   tv+++pv +  G  + +d+++++ +p T+
     ah03136    62 VKMMKMKTF---MMICFHLINTVTFVPVSKvSGQTE-VDDILAAVRPTTR 107  

                   lVaithvSNvtGtvnPveeigklahe.yPG.........AlvvVDaAQav
                   lV i+ ++N+tG+v+Pv+ei +++++ +  ++   + +++lv++DaAQa 
     ah03136   108 LVTIMLANNETGIVMPVPEISQRIKAlN-QervaaglppILVHTDAAQAL 156  

                   gHipiDvqalgvDFlaFSGHKglyGPtGiGVLYgkrellekl...pPllg
                   g++ +Dv +lgvDFl + GHK +yGP  iG+LY++   l+++++  P l+
     ah03136   157 GKQRVDVEDLGVDFLTIVGHK-FYGPR-IGALYIRG--LGEFtplYPMLF 202  

                   GGgMietvslqgttvffaeaPwkFEhAGTPniagiiGLgaAldylkeeig
                   GGg       q++          F+  GT+n++ i GLg+    +     
     ah03136   203 GGG-------QERN---------FR-PGTENTPMIAGLGK----V----- 226  

                   leaieahekeLaeylyerLlaipgirlryGvpavaerrasiisFnfPkgv
                                                  p                  
     ah03136   227 --------------------------S----P------------------ 228  

                   hphDvatlLderfGIAVRslkGhhCASGsLqPlmkrlgvekpytaAhgtl
                           L e+      s                               
     ah03136   229 ------GELEEM------S------------------------------- 235  

                   RaSlyiYNTeeevdrL<-*
                                      
     ah03136     - ----------------    -    

PF00266.9.fs: domain 1 of 1, from 91 to 226: score 102.4, E = 1.3e-27
                   *->GlldvldeleklitprTklVaithvSNvtGtvnPveeigklahe.yP
                      G  + +d+++++ +p T+lV i+ ++N+tG+v+Pv+ei +++++ + 
     ah03136    91    GQTE-VDDILAAVRPTTRLVTIMLANNETGIVMPVPEISQRIKAlN- 135  

                   G.........AlvvVDaAQavgHipiDvqalgvDFlaFSGHKglyGPtGi
                    ++   + +++lv++DaAQa g++ +Dv +lgvDFl + GHK +yGP  i
     ah03136   136 QervaaglppILVHTDAAQALGKQRVDVEDLGVDFLTIVGHK-FYGPR-I 183  

                   GVLYgkrellekl...pPllgGGgMietvslqgttvffaeaPwkFEhAGT
                   G+LY++   l+++++  P l+GGg       q++          F+  GT
     ah03136   184 GALYIRG--LGEFtplYPMLFGGG-------QERN---------FR-PGT 214  

                   PniagiiGLgaA<-*
                   +n++ i GLg++   
     ah03136   215 ENTPMIAGLGKV    226  

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