hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-21372340/chunk_1/iprscan-20080806-21372340.nocrc
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Query sequence: ah03205
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF00535.16.fs   Glycosyl transferase family 2            50.5    9.8e-15   1
PF00535.16.ls   Glycosyl transferase family 2            52.4    1.4e-12   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF00535.16.fs     1/1     305   463 ..     1   149 []    50.5  9.8e-15
PF00535.16.ls     1/1     305   463 ..     1   149 []    52.4  1.4e-12

Alignments of top-scoring domains:
PF00535.16.fs: domain 1 of 1, from 305 to 463: score 50.5, E = 9.8e-15
                   *->SiiiPtYNeekyleecleSllnQttyenfEiivVDDgStDgtveiae
                      +i   t+ ++++l++++ S+++   y+ + +++ DD      +++  
     ah03205   305    TIATKTFLRYDRLRALITSIRRF--YPTVTVVIADDSD--KPERVSG 347  

                   eyakdprirvirleenlGlaaArNaGlkkAtGdydyiaflDaDdel.pd.
                    y     +  +  + ++G  a+rN +++++t++  y++++D+D +++  +
     ah03205   348 PY-----VEHYLMPFGKGWFAGRNLAVSQVTTK--YVLWVDDDFVFtARt 390  

                   wleklvellekngadivig.rv.in.e.n.kgr.......lngk.l.r.l
                   +le+lv+ le+++ d+v+ +  +++ e++    + + +  ++g+  +r++
     ah03205   391 RLERLVDVLERTPLDLVGQgLQdVGvEkGlEQAkatagalRPGTaSpRtK 440  

                   .l.v.fli.snalyrrealekll<-*
                   + + + +++     r ea e+     
     ah03205   441 rEpRsGAWeLSGSCRGEAEEDGA    463  

PF00535.16.ls: domain 1 of 1, from 305 to 463: score 52.4, E = 1.4e-12
                   *->SiiiPtYNeekyleecleSllnQttyenfEiivVDDgStDgtveiae
                      +i   t+ ++++l++++ S+++   y+ + +++ DD      +++  
     ah03205   305    TIATKTFLRYDRLRALITSIRRF--YPTVTVVIADDSD--KPERVSG 347  

                   eyakdprirvirleenlGlaaArNaGlkkAtGdydyiaflDaDdel.pd.
                    y     +  +  + ++G  a+rN +++++t++  y++++D+D +++  +
     ah03205   348 PY-----VEHYLMPFGKGWFAGRNLAVSQVTTK--YVLWVDDDFVFtARt 390  

                   wleklvellekngadivig.rv.in.e.n.kgr.......lngk.l.r.l
                   +le+lv+ le+++ d+v+ +  +++ e++    + + +  ++g+  +r++
     ah03205   391 RLERLVDVLERTPLDLVGQgLQdVGvEkGlEQAkatagalRPGTaSpRtK 440  

                   .l.v.fli.snalyrrealekll<-*
                   + + + +++     r ea e+     
     ah03205   441 rEpRsGAWeLSGSCRGEAEEDGA    463  

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