hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-21483827/chunk_1/iprscan-20080806-21483827.nocrc
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Query sequence: ah03430
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF00916.10.fs  Sulfate transporter family               229.5      7e-66   1
PF00916.10.ls  Sulfate transporter family               123.9    4.2e-34   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF00916.10.ls    1/1       6   217 ..     1   328 []   123.9  4.2e-34
PF00916.10.fs    1/1      39   217 ..   144   328 .]   229.5    7e-66

Alignments of top-scoring domains:
PF00916.10.ls: domain 1 of 1, from 6 to 217: score 123.9, E = 4.2e-34
                   *->lGllRLGfLveflSravisGFmaGaAilIllsQLkgllGlsnlftrh
                                                         + ++      ++
     ah03430     6    ----------------------------------QHPCR------VS 12   

                   sgivsvlralfdlvdnlgkfakwnwatlviglsfLifLliikllpnlkkr
                   sg++ v + +                            +++  ++     
     ah03430    13 SGLHQVREGWA--------------------------ARTGPCFG----- 31   

                   kkklfwipapapLvavilaTlisylfnrkladrygvsiiGeipsGllppp
                                           l+     d              l pp
     ah03430    32 ------------------------LT-----DT---------SHR-LVPP 42   

                   slPdlnlspstlldllpialalAlvgllesiltaksfakkkgykiDsNkE
                     P+++l +++++ ++ i    A+vg++ +i+ +k fa ++gy++DsN+E
     ah03430    43 VAPNTQLFSKLVGSAFTI----AVVGFAIAISLGKIFALRHGYRVDSNQE 88   

                   LvAqGiaNIvsslfggypatgsfsRSaVNvkaGakTqLSgivmavvvllv
                   LvA+G++N++++ f ++p+++s sRS+V +++G+++q++g ++++++ll+
     ah03430    89 LVALGLSNLIGGIFQCFPVSCSMSRSLVQESTGGNSQVAGAISSLFILLI 138  

                   llfltplleyiPmavLaAIiivaliglLidwselirllwklsksDfliwl
                   ++ l+ l++ +P+avLaAIiiv+l+g+L+++s+++  lwk ++ D liwl
     ah03430   139 IVKLGELFHDLPKAVLAAIIIVNLKGMLRQLSDMRS-LWKANRADLLIWL 187  

                   atffgtvfvdNleiGvlvGVaiSllflilrv<-*
                   +tf  t+++  l  G++v+V++Sll +++r+   
     ah03430   188 VTFTATILLN-LDLGLVVAVIFSLLLVVVRT    217  

PF00916.10.fs: domain 1 of 1, from 39 to 217: score 229.5, E = 7e-66
                   *->lpppslPdlnlspstlldllpialalAlvgllesiltaksfakkkgy
                      l pp  P+++l +++++ ++ i    A+vg++ +i+ +k fa ++gy
     ah03430    39    LVPPVAPNTQLFSKLVGSAFTI----AVVGFAIAISLGKIFALRHGY 81   

                   kiDsNkELvAqGiaNIvsslfggypatgsfsRSaVNvkaGakTqLSgivm
                   ++DsN+ELvA+G++N++++ f ++p+++s sRS+V +++G+++q++g ++
     ah03430    82 RVDSNQELVALGLSNLIGGIFQCFPVSCSMSRSLVQESTGGNSQVAGAIS 131  

                   avvvllvllfltplleyiPmavLaAIiivaliglLidwselirllwklsk
                   ++++ll+++ l+ l++ +P+avLaAIiiv+l+g+L+++s+++  lwk ++
     ah03430   132 SLFILLIIVKLGELFHDLPKAVLAAIIIVNLKGMLRQLSDMRS-LWKANR 180  

                   sDfliwlatffgtvfvdNleiGvlvGVaiSllflilrv<-*
                    D liwl+tf  t+++  l  G++v+V++Sll +++r+   
     ah03430   181 ADLLIWLVTFTATILLN-LDLGLVVAVIFSLLLVVVRT    217  

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