hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080806/iprscan-20080806-21540650/chunk_1/iprscan-20080806-21540650.nocrc
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Query sequence: ah03580
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
PF00122.10.fs E1-E2 ATPase                               291.9    2.7e-88   1
PF00122.10.ls E1-E2 ATPase                               272.9    5.8e-79   1
PF00702.16.fs haloacid dehalogenase-like hydrolase       117.9    2.2e-33   1
PF00702.16.ls haloacid dehalogenase-like hydrolase       119.8    7.2e-33   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PF00122.10.fs   1/1       1   214 [.    18   245 .]   291.9  2.7e-88
PF00122.10.ls   1/1       1   214 [.     1   245 []   272.9  5.8e-79
PF00702.16.fs   1/1     218   485 ..     1   183 []   117.9  2.2e-33
PF00702.16.ls   1/1     218   485 ..     1   183 []   119.8  7.2e-33

Alignments of top-scoring domains:
PF00122.10.fs: domain 1 of 1, from 1 to 214: score 291.9, E = 2.7e-88
                   *->srAekAleaLkklvpptAtVlRdG.....gkeeeipaeeLvpGDiVe
                      s+++ Al++L++l++++AtV++ G+++   +ee++p e ++ GDiV+
     ah03580     1    SKTSEALAKLMSLQATEATVVTLGednliIREEQVPMELVQRGDIVR 47   

                   vkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhsdvvtpdnplerg
                   v pG + P+Dg+v+eg++  + DES +TGE++PV+K           ++g
     ah03580    48 VVPGGKFPVDGKVLEGNT--MADESLITGEAMPVTK-----------KPG 84   

                   nmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeAqssktPlQrlldk
                   ++V+aG+++ +Gs  +++t++G dT+l++I+kLVeeAq sk+P+Q+l+d+
     ah03580    85 STVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADR 134  

                   fgkiltpvililavlvfiiwllrnfn.aafggswlegllyalifavallV
                   f+++++p+i+i+++l+ ++++   ++ +++   +++    a+++++++l 
     ah03580   135 FSGYFVPFIIIMSTLT-LVNPN--KHiSQTEVIIRF----AFQTSITVLC 177  

                   aAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt<-*
                   +AcP+ L+l++++a+++Gtg +A++g+L+Kg+  +E+   
     ah03580   178 IACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEM    214  

PF00122.10.ls: domain 1 of 1, from 1 to 214: score 272.9, E = 5.8e-79
                   *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdG.....g
                                       s+++ Al++L++l++++AtV++ G+++   
     ah03580     1    -----------------SKTSEALAKLMSLQATEATVVTLGednliI 30   

                   keeeipaeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlP
                   +ee++p e ++ GDiV+v pG + P+Dg+v+eg++  + DES +TGE++P
     ah03580    31 REEQVPMELVQRGDIVRVVPGGKFPVDGKVLEGNT--MADESLITGEAMP 78   

                   VeKhsdvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakL
                   V+K           ++g++V+aG+++ +Gs  +++t++G dT+l++I+kL
     ah03580    79 VTK-----------KPGSTVIAGSINAHGSVLIKATHVGNDTTLAQIVKL 117  

                   VeeAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfn.aafggs
                   VeeAq sk+P+Q+l+d+f+++++p+i+i+++l+ ++++   ++ +++   
     ah03580   118 VEEAQMSKAPIQQLADRFSGYFVPFIIIMSTLT-LVNPN--KHiSQTEVI 164  

                   wlegllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglp
                   +++    a+++++++l +AcP+ L+l++++a+++Gtg +A++g+L+Kg+ 
     ah03580   165 IRF----AFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGK 210  

                   AvEt<-*
                    +E+   
     ah03580   211 PLEM    214  

PF00702.16.fs: domain 1 of 1, from 218 to 485: score 117.9, E = 2.2e-33
                   *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.lpleevekllgrg
                      ik+v FDk+GT+t+g +p +++++     +    + + +v   ++  
     ah03580   218    IKTVMFDKTGTITHG-VPRVMRVLLLGDVATLPlRKVLAVVGTAEAS 263  

                   l.g.erilleggltaell................................
                   +++++ ++ + ++++el++++ +  ++    ++ + + + ++ ++   ++
     ah03580   264 SeHpLGVAVTKYCKEELGtetlgyctdfqavpgcgigckvsnvegilahs 313  

                   ..................................................
                   +++ + + ++ ++ ++ + +++  + + +   ++++  ++++ + +++ +
     ah03580   314 erplsapashlneagslpaekdaapqtfsvlignrewlrrngltissdvs 363  

                   ..................d.evlglial.dklypgarealkaLkrrGikv
                   +  ++++ ++ +      d+++ g ia  d ++ +a+ a+  L+++G++v
     ah03580   364 damtdhemkgqtailvaiDgVLCGMIAIaDAVKQEAALAVHTLQSMGVDV 413  

                   ailTggdr.naeallealgla.lfdviidsdevggvgpivvgKPkpeifl
                   +++Tg++r++a+a      +a+ +++  + +ev+           p  + 
     ah03580   414 VLITGDNRkTARA------IAtQVGINKVFAEVL-----------PSHKV 446  

                   lalerlgvkpeevgpevlmVGDgvnDapalaaAGvgvamgngg<-*
                   + +++l+ k+++v    +mVGDgvnD pala+A++gva+g+g+   
     ah03580   447 AKVQELQNKGKKV----AMVGDGVNDSPALAQADMGVAIGTGT    485  

PF00702.16.ls: domain 1 of 1, from 218 to 485: score 119.8, E = 7.2e-33
                   *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.lpleevekllgrg
                      ik+v FDk+GT+t+g +p +++++     +    + + +v   ++  
     ah03580   218    IKTVMFDKTGTITHG-VPRVMRVLLLGDVATLPlRKVLAVVGTAEAS 263  

                   l.g.erilleggltaell................................
                   +++++ ++ + ++++el++++ +  ++    ++ + + + ++ ++   ++
     ah03580   264 SeHpLGVAVTKYCKEELGtetlgyctdfqavpgcgigckvsnvegilahs 313  

                   ..................................................
                   +++ + + ++ ++ ++ + +++  + + +   ++++  ++++ + +++ +
     ah03580   314 erplsapashlneagslpaekdaapqtfsvlignrewlrrngltissdvs 363  

                   ..................d.evlglial.dklypgarealkaLkrrGikv
                   +  ++++ ++ +      d+++ g ia  d ++ +a+ a+  L+++G++v
     ah03580   364 damtdhemkgqtailvaiDgVLCGMIAIaDAVKQEAALAVHTLQSMGVDV 413  

                   ailTggdr.naeallealgla.lfdviidsdevggvgpivvgKPkpeifl
                   +++Tg++r++a+a      +a+ +++  + +ev+           p  + 
     ah03580   414 VLITGDNRkTARA------IAtQVGINKVFAEVL-----------PSHKV 446  

                   lalerlgvkpeevgpevlmVGDgvnDapalaaAGvgvamgngg<-*
                   + +++l+ k+++v    +mVGDgvnD pala+A++gva+g+g+   
     ah03580   447 AKVQELQNKGKKV----AMVGDGVNDSPALAQADMGVAIGTGT    485  

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