hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080806/iprscan-20080806-21540650/chunk_1/iprscan-20080806-21540650.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ah03580 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01525 ATPase-IB_hvy: heavy metal translocatin 721.2 2.4e-214 1 TIGR01511 ATPase-IB1_Cu: copper-translocating P-t 657.2 4.2e-195 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 238.0 6.6e-69 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01511 1/1 1 571 [. 1 545 [] 657.2 4.2e-195 TIGR01525 1/1 1 570 [. 1 639 [] 721.2 2.4e-214 TIGR01494 1/2 29 244 .. 39 237 .. 101.8 6.8e-28 TIGR01494 2/2 372 541 .. 304 465 .. 136.2 2.9e-38 Alignments of top-scoring domains: TIGR01511: domain 1 of 1, from 1 to 571: score 657.2, E = 4.2e-195 *->aGrpFYksAwkaLrhkapnMDtLIaLGTtvAYlySlvalhtfFdasa ah03580 - ----------------------------------------------- - mLitfiLLGrwLEelAkgrasdAlskLakLqPetAtlltdd......... +++s+Al kL++Lq+++At++t ++++ +++ ah03580 1 -----------------SKTSEALAKLMSLQATEATVVTLGednliiree 33 .vpvaelqpGDivkVlPGekiPVDGtVieGeSevDESlvTGESlPVpKkv +vp +++q+GDiv+V PG k+PVDG V eG ++ DESl+TGE++PV+Kk+ ah03580 34 qVPMELVQRGDIVRVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKP 83 GDtViaGTvNgtGsLvvkaTkvGedttLaqIvelVrqAQqsKApiqrlAD G+tViaG++N +Gs+++kaT+vG dttLaqIv+lV++AQ+sKApiq+lAD ah03580 84 GSTVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLAD 133 kvAgyFVPvviaiAilTf...........viWlfALetaVtVLiIACPCA + +gyFVP++i+ lT+ +++++ ++++vi fA++t++tVL+IACPC ah03580 134 RFSGYFVPFIIIMSTLTLvnpnkhisqteVIIRFAFQTSITVLCIACPCS 183 LGLAtPtvimVaTGvaAknGvLiKdgdALErAanidtVvFDKTGTLTqGk LGLAtPt++mV+TGvaA+nG+LiK+g++LE+A++i+tV+FDKTGT+T+G ah03580 184 LGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGV 233 ptVtdvkvfsds.......lLalaaaLEasSeHPlAkAIvsYak...... p+V+ v+ ++d+ + + +++La+++++EasSeHPl+ A+++Y+k++ +++ ah03580 234 PRVMRVLLLGDVatlplrkVLAVVGTAEASSEHPLGVAVTKYCKeelgte 283 ............GkGvegtv.............................. + + ++ + +G G+ ++v++ ++ +++++ + + ++ ++ ++ + + ah03580 284 tlgyctdfqavpGCGIGCKVsnvegilahserplsapashlneagslpae 333 ...eGtkhkiqlGNekllgengi........ktdeaaeggttsvlvavng ++ +++ ++++GN+++l++ng++ +++ ++ +++++ +g t++lva +g ah03580 334 kdaAPQTFSVLIGNREWLRRNGLtissdvsdAMTDHEMKGQTAILVAIDG 383 eLagvlalaDqlkPeakevIqaLkrrGIepvMLTGDNrktAkavAkeLGI L+g +a+aD +k ea+++++ L+++G+ +v++TGDNrktA+a+A ++GI ah03580 384 VLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRKTARAIATQVGI 433 n.vrAeVlPddKaalikelqe..kvVaMVGDGINDAPALAqADVGIAiga n+v+AeVlP +K+a+++elq ++k+VaMVGDG+ND+PALAqAD G+Aig+ ah03580 434 NkVFAEVLPSHKVAKVQELQNkgKKVAMVGDGVNDSPALAQADMGVAIGT 483 GtDVAieaADiVLl.ndLkdVataIdlSrkTlrrikqNLlWAlgYNviaI GtDVAieaAD+VL++ndL dV++ I lS+ T+rri++NL++Al+YN+++I ah03580 484 GTDVAIEAADVVLIrNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGI 533 PiAAGvlyPaggilLsPavAgaAMalSSVsVVlNalrLr<-* PiAAGv++P+g i+L+P++++aAMa SSVsVVl++l L+ ah03580 534 PIAAGVFMPIG-IVLQPWMGSAAMAASSVSVVLSSLQLK 571 TIGR01525: domain 1 of 1, from 1 to 570: score 721.2, E = 2.4e-214 *->mDtLmalAaiaAyamglvlegahafFdtsvlLlflfllGetLEerAk ah03580 - ----------------------------------------------- - grasralsaLlaLaPstArvlqgdGelqdn.ddseeeVpveelqvGDivv +++s+al++L++L++++A+v++ + +dn ee+Vp e++q GDiv+ ah03580 1 SKTSEALAKLMSLQATEATVVTLG---EDNlIIREEQVPMELVQRGDIVR 47 VrpGEriPVDGeVisGesevDESaLTGESmPVeKkeGdeVfAGtiNgdGs V pG + PVDG+V++G ++ DES++TGE+mPV+Kk+G++V+AG+iN +Gs ah03580 48 VVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGS 97 LtirvTktgedstlaqIveLVeeAqssKapiqrlaDriasyyvpavlaiA + i++T++g d+tlaqIv+LVeeAq+sKapiq+laDr+++y+vp++++ + ah03580 98 VLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIMS 147 lltflvwlalgarpFvieklvAffgyr.k.lksdnvrealyrAvaVLvvA lt + + ++++ ++ ++r+a++++++VL++A ah03580 148 TLTLVNPN------------------KhIsQTEVIIRFAFQTSITVLCIA 179 CPCALgLAtPvAilvAigaAArrGvLiKgGaaLEkLakvktVvFDKTGTL CPC LgLAtP+A++v++g+AA++G+LiKgG LE+++k+ktV+FDKTGT+ ah03580 180 CPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTI 229 TtGkptVvdieplddssqgksgiseeelLaalAaalEqsSsHPlArAIvr T+G p+V+ + l+d+ + +La +++ +E+sS+HPl+ A+ + ah03580 230 THGVPRVMRVLLLGDVATLP----LRKVLA-VVGTAEASSEHPLGVAVTK 274 yakkEgsderglelpkvseeavedveevpGkGvsakvdgqet........ y+k ++l + + + +d+++vpG+G+ kv e+ +++++ ah03580 275 YCK------EELGTETLG--YCTDFQAVPGCGIGCKVSNVEGilahserp 316 .......................arevriGnprfmgeIdleldaeeneke + + ++ ++ ++ + +++ +++ v+iGn+++++ ++++ + ah03580 317 lsapashlneagslpaekdaapqTFSVLIGNREWLR----RNGLTI---- 358 lkaskellnegisqgktvvlvavdgkellGvialrDqlRpeakeaiaaLk ++++ +++ +++ +g t++lva dg l+G+ia++D ++ ea+ a++ L+ ah03580 359 SSDVSDAMTDHEMKGQTAILVAIDG-VLCGMIAIADAVKQEAALAVHTLQ 407 rkgGiievvmLTGDnraaAeavAaeLGIeidevhAellPeDKlaiVkelq +g vv++TGDnr++A+a+A ++G i v+Ae+lP +K+a+V+elq ah03580 408 SMG--VDVVLITGDNRKTARAIATQVG--INKVFAEVLPSHKVAKVQELQ 453 aerySeegghvVaMVGDGiNDAPALAaAdVGIAmGasGsDvAieaADiVL +g++VaMVGDG+ND+PALA+Ad G+A+G +G+DvAieaAD+VL ah03580 454 ------NKGKKVAMVGDGVNDSPALAQADMGVAIG-TGTDVAIEAADVVL 496 lndndLsslptaidlSrktrriikQNlawAlgynlvaiplAaggllplwg +++ dL +++++i+lS++t+r+i+ Nl++Al+ynlv+ip+Aag+++p++ ah03580 497 IRN-DLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVFMPIG- 544 llLsPllAvllhegStvlVvLNsLRL<-* ++L+P++++++++ S+v+VvL+sL L ah03580 545 IVLQPWMGSAAMAASSVSVVLSSLQL 570 TIGR01494: domain 1 of 2, from 29 to 244: score 101.8, E = 6.8e-28 *->vlrnggveisskdlvvGDiVlvkkGdivPADgvLLsgscyVdessLT ++r +++++ + ++ GDiV+v +G+++P+Dg +L+g+++ des++T ah03580 29 IIR--EEQVPMELVQRGDIVRVVPGGKFPVDGKVLEGNTMADESLIT 73 GEsnpvlKt..............dapfagtynfnGtltlkvskiavvvyt GE pv+K+++++ ++ + ++ ++ t+++n+t ++++k+ + + ah03580 74 GEAMPVTKKpgstviagsinahgSVLIKATHVGNDTTLAQIVKLVE--EA 121 gfektplqrkldrlafifilfllllalsvfl.....ltliglwtffkifl ++k+p+q+ +dr++ +f++f+++ ++++++++++++ ++ ++f ah03580 122 QMSKAPIQQLADRFSGYFVPFIIIMSTLTLVnpnkhISQTEVII-RFAFQ 170 ralillviaiPiaLpvavtialavgdkrma...ilvrslnalEelGqvdy +++++l ia+P++L++a+++a++vg++ +a+++il++++ lE + ++++ ah03580 171 TSITVLCIACPCSLGLATPTAVMVGTGVAAqngILIKGGKPLEMAHKIKT 220 icsDKTGTLTenkmtfkkvyigge<-* + +DKTGT+T +++ +++v + g+ ah03580 221 VMFDKTGTITHGVPRVMRVLLLGD 244 TIGR01494: domain 2 of 2, from 372 to 541: score 136.2, E = 2.9e-38 *->eGlRtLavAykeellGltaieDpLredvketIeeLkraGikvwMlTG +G +++ vA++ l+G++ai D ++ +++ ++++L+ +G+ v+++TG ah03580 372 KGQTAILVAIDGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITG 418 DnveTAiaIAkecgl...fARvsPeqKaeiVellqkrgaiVamiGDGaND Dn+ TA+aIA ++g+++ fA+v P++K + V+ lq++g+ Vam+GDG+ND ah03580 419 DNRKTARAIATQVGInkvFAEVLPSHKVAKVQELQNKGKKVAMVGDGVND 468 apALkaADVGiaig.....AkaaaDivltddnlslivlllvhGRwtykri pAL++AD G+aig++++ A +aaD vl++ +l +v ++ ++ t ri ah03580 469 SPALAQADMGVAIGtgtdvAIEAADVVLIRNDLLDVVASIHLSKRTVRRI 518 kklilyalyynliliillfvlsv<-* +++ al+ynl+ i+++++ ++ ah03580 519 RINLVLALIYNLVGIPIAAGVFM 541 //