# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oah04629.fasta.nr -Q ah04629.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ah04629, 325 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823309 sequences Expectation_n fit: rho(ln(x))= 6.8401+/-0.000195; mu= 2.2667+/- 0.011 mean_var=106.0097+/-20.316, 0's: 39 Z-trim: 42 B-trim: 3 in 1/67 Lambda= 0.124567 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088516|dbj|BAD92705.1| ubiquilin 1 isoform 1 ( 325) 2111 389.4 4.4e-106 gi|12060171|dbj|BAB20436.1| DA41 [Homo sapiens] ( 589) 2100 387.5 2.9e-105 gi|75041215|sp|Q5R684.1|UBQL1_PONAB Ubiquilin-1 ( 589) 2100 387.5 2.9e-105 gi|48475013|sp|Q9UMX0.2|UBQL1_HUMAN Ubiquilin-1 (P ( 589) 2100 387.5 2.9e-105 gi|193786567|dbj|BAG51350.1| unnamed protein produ ( 589) 2100 387.5 2.9e-105 gi|33873368|gb|AAH10066.1| Ubiquilin 1 [Homo sapie ( 561) 2097 387.0 4e-105 gi|12052812|emb|CAB66578.1| hypothetical protein [ ( 589) 2095 386.6 5.4e-105 gi|193786561|dbj|BAG51344.1| unnamed protein produ ( 589) 2093 386.3 6.9e-105 gi|24659706|gb|AAH39294.1| Ubiquilin 1 [Homo sapie ( 589) 2088 385.4 1.3e-104 gi|73946500|ref|XP_533514.2| PREDICTED: similar to ( 589) 2030 374.9 1.8e-101 gi|73946510|ref|XP_858219.1| PREDICTED: similar to ( 561) 2027 374.4 2.5e-101 gi|73946508|ref|XP_858181.1| PREDICTED: similar to ( 576) 2027 374.4 2.5e-101 gi|194224707|ref|XP_001916268.1| PREDICTED: ubiqui ( 560) 2025 374.0 3.1e-101 gi|14486422|gb|AAK61367.1| retina ubiquilin [Bos t ( 595) 2011 371.5 1.9e-100 gi|73946514|ref|XP_858301.1| PREDICTED: similar to ( 592) 2010 371.4 2.1e-100 gi|111308510|gb|AAI20032.1| UBQLN1 protein [Bos ta ( 589) 2008 371.0 2.7e-100 gi|30047889|gb|AAH51098.1| Similar to ubiquilin 1 ( 530) 1875 347.1 3.9e-93 gi|26340006|dbj|BAC33666.1| unnamed protein produc ( 555) 1875 347.1 4.1e-93 gi|48474876|sp|Q8R317|UBQL1_MOUSE Ubiquilin-1 (Pro ( 582) 1875 347.1 4.2e-93 gi|51593731|gb|AAH80667.1| Ubqln1 protein [Mus mus ( 582) 1875 347.1 4.2e-93 gi|74196824|dbj|BAE43132.1| unnamed protein produc ( 554) 1872 346.5 5.9e-93 gi|22137375|gb|AAH28857.1| Ubiquilin 1 [Mus muscul ( 554) 1872 346.5 5.9e-93 gi|47939201|gb|AAH72477.1| Ubiquilin 1 [Rattus nor ( 582) 1868 345.8 1e-92 gi|74224963|dbj|BAE38196.1| unnamed protein produc ( 554) 1867 345.6 1.1e-92 gi|149635308|ref|XP_001510805.1| PREDICTED: simila ( 531) 1866 345.5 1.2e-92 gi|149039803|gb|EDL93919.1| ubiquilin 1, isoform C ( 554) 1865 345.3 1.4e-92 gi|26339388|dbj|BAC33365.1| unnamed protein produc ( 554) 1863 344.9 1.8e-92 gi|48474728|sp|Q9JJP9|UBQL1_RAT Ubiquilin-1 (Prote ( 582) 1849 342.4 1.1e-91 gi|6014491|gb|AAF01365.1|AF177345_1 PLIC-1 [Mus mu ( 582) 1802 334.0 3.8e-89 gi|118104137|ref|XP_425028.2| PREDICTED: similar t ( 585) 1798 333.3 6.2e-89 gi|74007071|ref|XP_865005.1| PREDICTED: similar to ( 491) 1727 320.5 3.7e-85 gi|74007073|ref|XP_865024.1| PREDICTED: similar to ( 557) 1727 320.5 4.1e-85 gi|74007077|ref|XP_852121.1| PREDICTED: similar to ( 579) 1727 320.5 4.3e-85 gi|74007075|ref|XP_865041.1| PREDICTED: similar to ( 585) 1727 320.5 4.3e-85 gi|74007069|ref|XP_549029.2| PREDICTED: similar to ( 623) 1727 320.5 4.6e-85 gi|119920845|ref|XP_587928.2| PREDICTED: similar t ( 592) 1724 320.0 6.3e-85 gi|10241759|emb|CAC09446.1| hypothetical protein [ ( 588) 1717 318.7 1.5e-84 gi|114688840|ref|XP_001148609.1| PREDICTED: hypoth ( 592) 1717 318.7 1.5e-84 gi|124056593|sp|Q9UHD9.2|UBQL2_HUMAN Ubiquilin-2 ( ( 624) 1717 318.7 1.6e-84 gi|114688844|ref|XP_001148687.1| PREDICTED: hypoth ( 624) 1717 318.7 1.6e-84 gi|6563288|gb|AAF17237.1|AF189009_1 ubiquitin-like ( 624) 1717 318.7 1.6e-84 gi|109130985|ref|XP_001096401.1| PREDICTED: simila ( 724) 1717 318.7 1.8e-84 gi|114688842|ref|XP_001148549.1| PREDICTED: simila ( 564) 1714 318.1 2.1e-84 gi|194227945|ref|XP_001914714.1| PREDICTED: simila ( 628) 1702 316.0 1e-83 gi|73946502|ref|XP_858058.1| PREDICTED: similar to ( 481) 1699 315.4 1.2e-83 gi|73946512|ref|XP_858264.1| PREDICTED: similar to ( 577) 1689 313.7 4.9e-83 gi|38648937|gb|AAH63190.1| Ubiquilin 2 [Xenopus tr ( 564) 1674 311.0 3.1e-82 gi|50418321|gb|AAH77987.1| Ubqln2-prov protein [Xe ( 564) 1666 309.5 8.4e-82 gi|16307349|gb|AAH10213.1| Ubqln1 protein [Mus mus ( 435) 1558 290.1 4.7e-76 gi|74007067|ref|XP_864970.1| PREDICTED: similar to ( 572) 1547 288.1 2.3e-75 >>gi|62088516|dbj|BAD92705.1| ubiquilin 1 isoform 1 vari (325 aa) initn: 2111 init1: 2111 opt: 2111 Z-score: 2059.7 bits: 389.4 E(): 4.4e-106 Smith-Waterman score: 2111; 100.000% identity (100.000% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAGSNVTTSSTPNSNSTSGSATSNPFGLGGLGG 10 20 30 40 50 60 70 80 90 100 110 120 ah0462 LAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LAGLSSLGLNTTNFSELQSQMQRQLLSNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQ 70 80 90 100 110 120 130 140 150 160 170 180 ah0462 MQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MQQLIQRNPEISHMLNNPDIMRQTLELARNPAMMQEMMRNQDRALSNLESIPGGYNALRR 130 140 150 160 170 180 190 200 210 220 230 240 ah0462 MYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MYTDIQEPMLSAAQEQFGGNPFASLVSNTSSGEGSQPSRTENRDPLPNPWAPQTSQSSSA 190 200 210 220 230 240 250 260 270 280 290 300 ah0462 SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SSGTASTVGGTTGSTASGTSGQSTTAPNLVPGVGASMFNTPGMQSLLQQITENPQLMQNM 250 260 270 280 290 300 310 320 ah0462 LSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::: gi|620 LSAPYMRSMMQSLSQNPDLAAQVSL 310 320 >>gi|12060171|dbj|BAB20436.1| DA41 [Homo sapiens] (589 aa) initn: 2263 init1: 2100 opt: 2100 Z-score: 2045.0 bits: 387.5 E(): 2.9e-105 Smith-Waterman score: 2100; 99.385% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|120 ISKRFKSHTDQLVLIFAGKILKDQDTSSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|120 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|120 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|75041215|sp|Q5R684.1|UBQL1_PONAB Ubiquilin-1 gi (589 aa) initn: 2263 init1: 2100 opt: 2100 Z-score: 2045.0 bits: 387.5 E(): 2.9e-105 Smith-Waterman score: 2100; 99.385% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|750 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|750 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|750 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|48475013|sp|Q9UMX0.2|UBQL1_HUMAN Ubiquilin-1 (Prote (589 aa) initn: 2263 init1: 2100 opt: 2100 Z-score: 2045.0 bits: 387.5 E(): 2.9e-105 Smith-Waterman score: 2100; 99.385% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|484 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|484 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|484 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|193786567|dbj|BAG51350.1| unnamed protein product [ (589 aa) initn: 2263 init1: 2100 opt: 2100 Z-score: 2045.0 bits: 387.5 E(): 2.9e-105 Smith-Waterman score: 2100; 99.385% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|193 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|193 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|193 AGNPQLQEQMRQQLPTFLQQMRNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|33873368|gb|AAH10066.1| Ubiquilin 1 [Homo sapiens] (561 aa) initn: 2260 init1: 2097 opt: 2097 Z-score: 2042.4 bits: 387.0 E(): 4e-105 Smith-Waterman score: 2097; 99.690% identity (100.000% similar) in 323 aa overlap (1-323:95-417) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|338 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|338 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|338 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMQNPDTLS 370 380 390 400 410 420 gi|338 AMSNPRAMQALLQIQQGLQTLATEAPGLIPGFTPGLGALGSTGGSSGTNGSNATPSENTS 430 440 450 460 470 480 >>gi|12052812|emb|CAB66578.1| hypothetical protein [Homo (589 aa) initn: 2258 init1: 2095 opt: 2095 Z-score: 2040.2 bits: 386.6 E(): 5.4e-105 Smith-Waterman score: 2095; 99.077% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|120 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|120 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|120 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|193786561|dbj|BAG51344.1| unnamed protein product [ (589 aa) initn: 2258 init1: 2093 opt: 2093 Z-score: 2038.2 bits: 386.3 E(): 6.9e-105 Smith-Waterman score: 2093; 99.077% identity (99.692% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|193 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 MMVQIMENPLVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|193 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|193 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|24659706|gb|AAH39294.1| Ubiquilin 1 [Homo sapiens] (589 aa) initn: 2251 init1: 2088 opt: 2088 Z-score: 2033.4 bits: 385.4 E(): 1.3e-104 Smith-Waterman score: 2088; 99.077% identity (99.385% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG :::::::::::::::::::::::::::::: gi|246 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTAG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|246 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|246 MMVQIMENPFVQSMLSNHDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|246 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|246 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|246 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|246 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 >>gi|73946500|ref|XP_533514.2| PREDICTED: similar to ubi (589 aa) initn: 2198 init1: 2030 opt: 2030 Z-score: 1977.0 bits: 374.9 E(): 1.8e-101 Smith-Waterman score: 2030; 95.077% identity (99.077% similar) in 325 aa overlap (1-325:95-419) 10 20 30 ah0462 GIHDGLTVHLVIKTQNRPQDHSAQQTNTAG ::::::::::::::::::::::::::::.: gi|739 ISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSAQQTNTSG 70 80 90 100 110 120 40 50 60 70 80 90 ah0462 SNVTTSSTPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLLSNPE :::::::.:..::::::::::::::::::::::::::::::::::::::::::::.:::: gi|739 SNVTTSSAPSTNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLMSNPE 130 140 150 160 170 180 100 110 120 130 140 150 ah0462 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARN 190 200 210 220 230 240 160 170 180 190 200 210 ah0462 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLVSNTS 250 260 270 280 290 300 220 230 240 250 260 270 ah0462 SGEGSQPSRTENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTSGQSTTAPNLV :::::::::::::::::::::::.::::::::.:.:.:::: ::.::::::::..:::: gi|739 SGEGSQPSRTENRDPLPNPWAPQASQSSSASSSTTSAVGGTGGSAASGTSGQSSSAPNLG 310 320 330 340 350 360 280 290 300 310 320 ah0462 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQVSL ::::::::::::::::::::::::::::::::::::::::::::::::::::. : gi|739 PGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLNNPLF 370 380 390 400 410 420 gi|739 AGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGLIPGF 430 440 450 460 470 480 325 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 6 22:57:34 2008 done: Wed Aug 6 23:00:09 2008 Total Scan time: 756.330 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]