# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oah05167.fasta.nr -Q ah05167.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ah05167, 155 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824494 sequences Expectation_n fit: rho(ln(x))= 4.8624+/-0.000179; mu= 8.2443+/- 0.010 mean_var=61.4481+/-11.962, 0's: 42 Z-trim: 47 B-trim: 0 in 0/66 Lambda= 0.163614 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62088528|dbj|BAD92711.1| calcium/calmodulin-dep ( 155) 1037 252.4 1.7e-65 gi|18448923|gb|AAL69958.1| CaM kinase II gamma G-2 ( 561) 647 160.8 2.4e-37 gi|1657464|gb|AAC48714.1| calcium/calmodulin-depen ( 539) 609 151.8 1.2e-34 gi|73953029|ref|XP_863725.1| PREDICTED: similar to ( 564) 609 151.8 1.2e-34 gi|119574918|gb|EAW54533.1| calcium/calmodulin-dep ( 267) 598 149.0 4.1e-34 gi|73952989|ref|XP_863295.1| PREDICTED: similar to ( 414) 598 149.1 5.7e-34 gi|73952987|ref|XP_863272.1| PREDICTED: similar to ( 436) 598 149.1 6e-34 gi|40226338|gb|AAH21269.2| CAMK2G protein [Homo sa ( 453) 598 149.1 6.2e-34 gi|165970452|gb|AAI58283.1| Unknown (protein for M ( 563) 599 149.4 6.2e-34 gi|148669542|gb|EDL01489.1| calcium/calmodulin-dep ( 496) 598 149.1 6.6e-34 gi|73952991|ref|XP_863318.1| PREDICTED: similar to ( 496) 598 149.1 6.6e-34 gi|90075068|dbj|BAE87214.1| unnamed protein produc ( 518) 598 149.2 6.9e-34 gi|422769|pir||B46619 Ca2+/calmodulin-dependent pr ( 518) 598 149.2 6.9e-34 gi|90074998|dbj|BAE87179.1| unnamed protein produc ( 518) 598 149.2 6.9e-34 gi|73953045|ref|XP_863906.1| PREDICTED: similar to ( 542) 598 149.2 7.1e-34 gi|149031243|gb|EDL86250.1| calcium/calmodulin-dep ( 278) 594 148.0 8.1e-34 gi|29124575|gb|AAH49002.1| Camk2g-prov protein [Xe ( 517) 597 148.9 8.1e-34 gi|10443736|gb|AAG17556.1|AF233631_1 calcium/calmo ( 564) 597 149.0 8.7e-34 gi|148669539|gb|EDL01486.1| calcium/calmodulin-dep ( 507) 594 148.2 1.3e-33 gi|3241847|dbj|BAA28869.1| calmodulin-dependent pr ( 518) 594 148.2 1.3e-33 gi|20177955|sp|Q923T9.1|KCC2G_MOUSE Calcium/calmod ( 529) 594 148.2 1.3e-33 gi|126272777|ref|XP_001363939.1| PREDICTED: simila ( 540) 593 148.0 1.6e-33 gi|149031245|gb|EDL86252.1| calcium/calmodulin-dep ( 276) 587 146.4 2.5e-33 gi|126272781|ref|XP_001364099.1| PREDICTED: simila ( 519) 590 147.3 2.5e-33 gi|73953037|ref|XP_863819.1| PREDICTED: similar to ( 515) 589 147.0 3e-33 gi|1245396|gb|AAB16865.1| CaMK-II, gamma [Homo sap ( 142) 581 144.8 4e-33 gi|560651|gb|AAB30670.1| Ca2+/calmodulin-dependent ( 518) 587 146.6 4.2e-33 gi|158256840|dbj|BAF84393.1| unnamed protein produ ( 518) 587 146.6 4.2e-33 gi|21707842|gb|AAH34044.1| Calcium/calmodulin-depe ( 527) 587 146.6 4.2e-33 gi|125289|sp|P11730.1|KCC2G_RAT Calcium/calmodulin ( 527) 587 146.6 4.2e-33 gi|109089281|ref|XP_001099567.1| PREDICTED: simila ( 527) 587 146.6 4.2e-33 gi|61354468|gb|AAX41004.1| calcium/calmodulin-depe ( 528) 587 146.6 4.2e-33 gi|149265235|ref|XP_001474549.1| PREDICTED: simila ( 612) 587 146.6 4.7e-33 gi|126272769|ref|XP_001363609.1| PREDICTED: simila ( 518) 585 146.1 5.8e-33 gi|73953017|ref|XP_863595.1| PREDICTED: similar to ( 519) 585 146.1 5.8e-33 gi|73953015|ref|XP_863574.1| PREDICTED: similar to ( 539) 585 146.1 5.9e-33 gi|119574913|gb|EAW54528.1| calcium/calmodulin-dep ( 253) 581 144.9 6.3e-33 gi|18448919|gb|AAL69956.1| CaM kinase II gamma J [ ( 516) 584 145.9 6.8e-33 gi|73953021|ref|XP_863639.1| PREDICTED: similar to ( 541) 584 145.9 7e-33 gi|126272763|ref|XP_001363366.1| PREDICTED: simila ( 527) 583 145.6 8.1e-33 gi|14795070|gb|AAK73545.1|AF389987_1 calcium/calmo ( 185) 577 143.9 9.4e-33 gi|119574919|gb|EAW54534.1| calcium/calmodulin-dep ( 504) 581 145.1 1.1e-32 gi|126272767|ref|XP_001363521.1| PREDICTED: simila ( 529) 581 145.2 1.1e-32 gi|3241845|dbj|BAA28868.1| calmodulin-dependent pr ( 450) 580 144.9 1.2e-32 gi|148669540|gb|EDL01487.1| calcium/calmodulin-dep ( 476) 580 144.9 1.2e-32 gi|18448915|gb|AAL69954.1| CaM kinase II gamma C-2 ( 487) 580 144.9 1.2e-32 gi|1657460|gb|AAC48712.1| calcium/calmodulin-depen ( 495) 580 144.9 1.3e-32 gi|560653|gb|AAB30671.1| Ca2+/calmodulin-dependent ( 495) 580 144.9 1.3e-32 gi|14795066|gb|AAK73544.1|AF389986_1 calcium/calmo ( 200) 574 143.2 1.6e-32 gi|73953019|ref|XP_863621.1| PREDICTED: similar to ( 480) 578 144.4 1.7e-32 >>gi|62088528|dbj|BAD92711.1| calcium/calmodulin-depende (155 aa) initn: 1037 init1: 1037 opt: 1037 Z-score: 1331.1 bits: 252.4 E(): 1.7e-65 Smith-Waterman score: 1037; 100.000% identity (100.000% similar) in 155 aa overlap (1-155:1-155) 10 20 30 40 50 60 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQTTVVHN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQTTVVHN 10 20 30 40 50 60 70 80 90 100 110 120 ah0516 ATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGLTSFEP 70 80 90 100 110 120 130 140 150 ah0516 EALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS ::::::::::::::::::::::::::::::::::: gi|620 EALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS 130 140 150 >>gi|18448923|gb|AAL69958.1| CaM kinase II gamma G-2 [Mu (561 aa) initn: 637 init1: 637 opt: 647 Z-score: 825.6 bits: 160.8 E(): 2.4e-37 Smith-Waterman score: 647; 71.724% identity (85.517% similar) in 145 aa overlap (12-155:335-477) 10 20 30 40 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPS :::. .... . : . :..:. .::. gi|184 LTTMLVSRNFSVGRQSSAPASPAASAAGLAGQAAKSLLNKKSDGGVKPQSNNKNSLVSPA 310 320 330 340 350 360 50 60 70 80 90 100 ah0516 RKGNLHLLSQEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN .. ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|184 QEPAPLQTAMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN 370 380 390 400 410 420 110 120 130 140 150 ah0516 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIP-PS ::::::::::::::::::::::::::::::::::::::::: :.:.. .: :: gi|184 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENREWV--RAADILLPAPSPPLPL 430 440 450 460 470 480 gi|184 SLLTFSSSQSPAFPLFDLLGCTLVYAFASLYPEDGLKLTPLKDLLQSPTCTFILQRLCGN 490 500 510 520 530 540 >>gi|1657464|gb|AAC48714.1| calcium/calmodulin-dependent (539 aa) initn: 609 init1: 609 opt: 609 Z-score: 777.4 bits: 151.8 E(): 1.2e-34 Smith-Waterman score: 609; 75.000% identity (87.500% similar) in 128 aa overlap (12-139:335-462) 10 20 30 40 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPS :::. .... . : . :..:. .::. gi|165 LTTMLVSRNFSVGRQSSAPASPAASAAGLAGQAAKSLLNKKSDGGVKPQSNNKNSLVSPA 310 320 330 340 350 360 50 60 70 80 90 100 ah0516 RKGNLHLLSQEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN .. ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 QEPAPLQTAMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN 370 380 390 400 410 420 110 120 130 140 150 ah0516 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::::::::::::::::: gi|165 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIG 430 440 450 460 470 480 gi|165 EDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGAPAAPLQ 490 500 510 520 530 >>gi|73953029|ref|XP_863725.1| PREDICTED: similar to cal (564 aa) initn: 609 init1: 609 opt: 609 Z-score: 777.1 bits: 151.8 E(): 1.2e-34 Smith-Waterman score: 609; 75.000% identity (87.500% similar) in 128 aa overlap (12-139:360-487) 10 20 30 40 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPS :::. .... . : . :..:. .::. gi|739 CASSLRDCIPSVGRQSSAPASPAASAAGLAGQAAKSLLNKKSDGGVKPQSNNKNSLVSPA 330 340 350 360 370 380 50 60 70 80 90 100 ah0516 RKGNLHLLSQEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN .. ..:::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QEPAPLQTAMEPQTTVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINN 390 400 410 420 430 440 110 120 130 140 150 ah0516 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::::::::::::::::: gi|739 GDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIG 450 460 470 480 490 500 gi|739 EDAACIAYIRLTQYIDGQGRPRTSQSEETRVWHRRDGKWLNVHYHCSGAPAAPLQ 510 520 530 540 550 560 >>gi|119574918|gb|EAW54533.1| calcium/calmodulin-depende (267 aa) initn: 594 init1: 594 opt: 598 Z-score: 767.7 bits: 149.0 E(): 4.1e-34 Smith-Waterman score: 598; 81.579% identity (90.351% similar) in 114 aa overlap (26-139:77-190) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . :..:. .::... ..:::: gi|119 RKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKPQSNNKNSLVSPAQEPAPLQTAMEPQT 50 60 70 80 90 100 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 110 120 130 140 150 160 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::: gi|119 TSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQY 170 180 190 200 210 220 >>gi|73952989|ref|XP_863295.1| PREDICTED: similar to cal (414 aa) initn: 594 init1: 594 opt: 598 Z-score: 765.0 bits: 149.1 E(): 5.7e-34 Smith-Waterman score: 598; 81.579% identity (90.351% similar) in 114 aa overlap (26-139:224-337) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . :..:. .::... ..:::: gi|739 RKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKPQSNNKNSLVSPAQEPAPLQTAMEPQT 200 210 220 230 240 250 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 260 270 280 290 300 310 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::: gi|739 TSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQY 320 330 340 350 360 370 >>gi|73952987|ref|XP_863272.1| PREDICTED: similar to cal (436 aa) initn: 594 init1: 594 opt: 598 Z-score: 764.6 bits: 149.1 E(): 6e-34 Smith-Waterman score: 598; 81.579% identity (90.351% similar) in 114 aa overlap (26-139:246-359) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . :..:. .::... ..:::: gi|739 RKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKPQSNNKNSLVSPAQEPAPLQTAMEPQT 220 230 240 250 260 270 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 280 290 300 310 320 330 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::: gi|739 TSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQY 340 350 360 370 380 390 >>gi|40226338|gb|AAH21269.2| CAMK2G protein [Homo sapien (453 aa) initn: 594 init1: 594 opt: 598 Z-score: 764.4 bits: 149.1 E(): 6.2e-34 Smith-Waterman score: 598; 81.579% identity (90.351% similar) in 114 aa overlap (26-139:263-376) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . :..:. .::... ..:::: gi|402 RKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKPQSNNKNSLVSPAQEPAPLQTAMEPQT 240 250 260 270 280 290 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|402 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 300 310 320 330 340 350 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::: gi|402 TSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQY 360 370 380 390 400 410 >>gi|165970452|gb|AAI58283.1| Unknown (protein for MGC:1 (563 aa) initn: 614 init1: 587 opt: 599 Z-score: 764.3 bits: 149.4 E(): 6.2e-34 Smith-Waterman score: 599; 80.702% identity (91.228% similar) in 114 aa overlap (26-139:373-486) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . ...:. .::.... :.:::: gi|165 RQTSAPVVAATSAANLVEQAAKSLLNKKTDGVKPQTNNKNSIISPAKENPPLQTSMEPQT 350 360 370 380 390 400 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 410 420 430 440 450 460 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS ::::::::::::::::::::::.: gi|165 TSFEPEALGNLVEGMDFHKFYFDNLLSKHTKPIHTTILNPHVHVIGEDAACIAYIRLTQY 470 480 490 500 510 520 >>gi|148669542|gb|EDL01489.1| calcium/calmodulin-depende (496 aa) initn: 594 init1: 594 opt: 598 Z-score: 763.8 bits: 149.1 E(): 6.6e-34 Smith-Waterman score: 598; 81.579% identity (90.351% similar) in 114 aa overlap (26-139:306-419) 10 20 30 40 50 ah0516 AGIFCLLEMAGGQASVVIIGSAGVLGCRWGSSGKSHSLSPSRKGNLHLLSQEPQT : . :..:. .::... ..:::: gi|148 RKLKGAILTTMLVSRNFSAAKSLLNKKSDGGVKPQSNNKNSLVSPAQEPAPLQTAMEPQT 280 290 300 310 320 330 60 70 80 90 100 110 ah0516 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TVVHNATDGIKGSTESCNTTTEDEDLKVRKQEIIKITEQLIEAINNGDFEAYTKICDPGL 340 350 360 370 380 390 120 130 140 150 ah0516 TSFEPEALGNLVEGMDFHKFYFENREWSCPRTASLSIPPS :::::::::::::::::::::::: gi|148 TSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAACIAYIRLTQY 400 410 420 430 440 450 155 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 6 23:45:46 2008 done: Wed Aug 6 23:48:42 2008 Total Scan time: 575.230 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]