hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080806/iprscan-20080806-23544119/chunk_1/iprscan-20080806-23544119.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ah05266 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.fs Protein kinase domain 245.6 9.6e-71 1 PF00069.15.ls Protein kinase domain 186.7 5.3e-53 1 PF00168.20.fs C2 domain 135.8 7.9e-40 1 PF00168.20.ls C2 domain 137.8 2.7e-38 1 PF00130.12.ls Phorbol esters/diacylglycerol binding dom 92.5 1.2e-24 1 PF00130.12.fs Phorbol esters/diacylglycerol binding dom 90.5 1.6e-24 1 PF07714.7.fs Protein tyrosine kinase 65.2 7.8e-19 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00130.12.ls 1/1 13 65 .. 1 55 [] 92.5 1.2e-24 PF00130.12.fs 1/1 13 65 .. 1 55 [] 90.5 1.6e-24 PF00168.20.fs 1/1 84 171 .. 1 88 [] 135.8 7.9e-40 PF00168.20.ls 1/1 84 171 .. 1 88 [] 137.8 2.7e-38 PF00069.15.fs 1/1 250 450 .. 1 214 [. 245.6 9.6e-71 PF00069.15.ls 1/1 250 460 .. 1 287 [] 186.7 5.3e-53 PF07714.7.fs 1/2 250 284 .. 1 40 [. 13.8 0.00063 PF07714.7.fs 2/2 322 443 .. 84 210 .. 51.4 8e-15 Alignments of top-scoring domains: PF00130.12.ls: domain 1 of 1, from 13 to 65: score 92.5, E = 1.2e-24 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F+ + t+ +ptfCdhCg++l+g l++qG+kC++C +nvHk+C+ + ah05266 13 HKFKIH-TYGSPTFCDHCGSLLYG-LIHQGMKCDTCDMNVHKQCVIN 57 VppeCgcg<-* Vp++Cg++ ah05266 58 VPSLCGMD 65 PF00130.12.fs: domain 1 of 1, from 13 to 65: score 90.5, E = 1.6e-24 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F+ + t+ +ptfCdhCg++l+g l++qG+kC++C +nvHk+C+ + ah05266 13 HKFKIH-TYGSPTFCDHCGSLLYG-LIHQGMKCDTCDMNVHKQCVIN 57 VppeCgcg<-* Vp++Cg++ ah05266 58 VPSLCGMD 65 PF00168.20.fs: domain 1 of 1, from 84 to 171: score 135.8, E = 7.9e-40 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L+Vtv AknL+p+D +ng+sDPYVk++l +d+k ++k+kTk+i++t ah05266 84 LHVTVRDAKNLIPMD-PNGLSDPYVKLKLIPDPKNeSKQKTKTIRST 129 lNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-* lNP+WNE+FtF p+ ++++L +e++D+dr +r+df+G s ah05266 130 LNPQWNESFTFK-LKPSDKDrRLSVEIWDWDRTTRNDFMGSLS 171 PF00168.20.ls: domain 1 of 1, from 84 to 171: score 137.8, E = 2.7e-38 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L+Vtv AknL+p+D +ng+sDPYVk++l +d+k ++k+kTk+i++t ah05266 84 LHVTVRDAKNLIPMD-PNGLSDPYVKLKLIPDPKNeSKQKTKTIRST 129 lNPvWNEtFtFevpppdlqe.tLeieVyDydrfgrddflGevs<-* lNP+WNE+FtF p+ ++++L +e++D+dr +r+df+G s ah05266 130 LNPQWNESFTFK-LKPSDKDrRLSVEIWDWDRTTRNDFMGSLS 171 PF00069.15.fs: domain 1 of 1, from 250 to 450: score 245.6, E = 9.6e-71 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr + +l +lG+GsfG+V +a +kgt++++A+Ki+kk+ + d + + ah05266 250 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTM 296 lsEiqilkrL.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls E ++l+ L++ p+ +l+ +f++ d+ly+V+Ey++gG dL+ +++ ah05266 297 V-EKRVLALLdKPPFLTQLHSCFQTVDRLYFVMEYVNGG----DLMYHIQ 341 etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng + g++ e +a +++ +i gl +LH++gii+RDLK++N++ld++g ah05266 342 ---QVGKF--KEPQAVFYVAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG 386 vvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv ++ KiaDFG +k + ++++ tf+GTp+Y+APE++ +++yg++v ah05266 387 HI----KIADFGMCKEH-MmDGVtTRTFCGTPDYIAPEIIA-YQPYGKSV 430 DvWSlGvilyelltGkpPFs<-* D+W++Gv+lye+l G+ F+ ah05266 431 DWWAYGVLLYEMLAGQVMFC 450 PF00069.15.ls: domain 1 of 1, from 250 to 460: score 186.7, E = 5.3e-53 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr + +l +lG+GsfG+V +a +kgt++++A+Ki+kk+ + d + + ah05266 250 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTM 296 lsEiqilkrL.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls E ++l+ L++ p+ +l+ +f++ d+ly+V+Ey++gG dL+ +++ ah05266 297 V-EKRVLALLdKPPFLTQLHSCFQTVDRLYFVMEYVNGG----DLMYHIQ 341 etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng + g++ e +a +++ +i gl +LH++gii+RDLK++N++ld++g ah05266 342 ---QVGKF--KEPQAVFYVAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG 386 vvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkv ++ KiaDFG +k + ++++ tf+GTp+Y+APE++ +++yg++v ah05266 387 HI----KIADFGMCKEH-MmDGVtTRTFCGTPDYIAPEIIA-YQPYGKSV 430 DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds D+W++Gv+lye+l G +++++ i + ah05266 431 DWWAYGVLLYEMLAG--------------QVMFCYIFM------------ 454 isrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* ++++c + ah05266 455 ------------------FVYCC-------------------V 460 PF07714.7.fs: domain 1 of 2, from 250 to 284: score 13.8, E = 0.00063 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeig<-* + ++ +LG+G+FG+V+++ k gte A+K+Lk+ + ah05266 250 FNFLMVLGKGSFGKVMLADRK----GTEELYAIKILKK-D 284 PF07714.7.fs: domain 2 of 2, from 322 to 443: score 51.4, E = 8e-15 *->g.lyiVtEymegGdLldfLrkhregrpLtlkdLlsfalQiAkGMeYL ++ly V+Ey+ gGdL + ++ ++++ ++ + + ++i+ G+ +L ah05266 322 DrLYFVMEYVNGGDLMYHIQQ---VGKFKEPQAVFYVAEISIGLFFL 365 esknfvHRDLAARNcLVsenlvVKIsDFGLaRdiynddyYvrkkgggk.l + ++++ RDL N+++++++++KI+DFG+++ ++ d+ + + ah05266 366 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT----TRTFcG 411 PvkWmAPEslkygkFtskSDVWSFGVlLWEif<-* APE ++y + D W++GVlL+E++ ah05266 412 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 443 //