hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-00074848/chunk_1/iprscan-20080807-00074848.nocrc
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Query sequence: ah05954
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00294                                                  32.9    4.3e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00294    1/1     446   464 ..     1    19 []    32.9  4.3e-05

Alignments of top-scoring domains:
SM00294: domain 1 of 1, from 446 to 464: score 32.9, E = 4.3e-05
                   *->myrykkRdkGSYhtnEakg<-*
                      +yr+kk+d+GSY ++E+k+   
     ah05954   446    IYRMKKKDEGSYTLEEPKQ    464  

//