hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-00184015/chunk_1/iprscan-20080807-00184015.nocrc
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Query sequence: ah06448
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
PF00330.10.ls Aconitase family (aconitate hydratase)        615.6     4e-182   1
PF00330.10.fs Aconitase family (aconitate hydratase)        614.5   8.6e-182   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
PF00330.10.fs   1/1      91   600 ..     1   512 []   614.5 8.6e-182
PF00330.10.ls   1/1      91   600 ..     1   512 []   615.6   4e-182

Alignments of top-scoring domains:
PF00330.10.fs: domain 1 of 1, from 91 to 600: score 614.5, E = 8.6e-182
                   *->TlyeKildaHvvdpadqdiergtslLylRPdRvlmqdvTspqAflgL
                       +   ++  ++ +     +++ + +  ++P+Rv+ qd+T+++A++++
     ah06448    91    -VKKQDIENILHWNV---TQHKNIEVPFKPARVILQDFTGVPAVVDF 133  

                   raagrpvrrvdgdadKvsPLSPttitcDHniptqkggekkalEvDlniei
                   +a++ +v++++gd +K++P+ P+++++DH+i+++    +++l  +  +e 
     ah06448   134 AAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEF 183  

                   ernkeqydfLeknvkeFgvgfwgpgskrQGIvHqigLEnGftlPGlelqD
                   ern+e+++fL+++ ++F +    p+++  GI+Hq++LE++   +    qD
     ah06448   184 ERNRERFEFLKWGSQAFHNMRIIPPGS--GIIHQVNLEYLARVVFD--QD 229  

                   GeliAYPDtlVGtDSHTpthGgLGaLAfGvGgsEaEhVlAgqplelkkPK
                   G  + YPD lVGtDSHT+++ gLG L++GvGg+EaE+V++gqp++++ P 
     ah06448   230 G--YYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQ 277  

                   vmgikltGklngGitaKDvILkviglltvkGGTGkvVEffGegiddLSme
                   v+g  l Gk+ + +t++D++L+++  l+  G++Gk+VEffG+g++ LS +
     ah06448   278 VIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIA 327  

                   gRaTICNMaiEiGAtaGlfppDettfkYlkgrgrapkaeeadeavakwkt
                   +RaTI+NM +E+GAta +fp+De+ + Yl  +gr+++  +  +++  + +
     ah06448   328 DRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVG 377  

                   LksDkdAne...EPqyDkvveldlsdiePsvtGPttPqdavpiselvpep
                   + +D   n+++++P +++vveldl+++ P   GP++Pqd+v++s++++++
     ah06448   378 MFRDF--NDpsqDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDF 425  

                   knNvld........pvkkakaerAlaYmglwpgtqlkeikVdvafIGSCT
                   ++  l  +++ ++  v+ +     ++++  + +++l ++ V++a+I+SCT
     ah06448   426 ES-CLGakqgfkgfQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCT 474  

                   NssieDlrrAAsivkgaaaekGkklkpkvkatVvPGSeqVkataEreGLd
                   N+s++++   A++++++a++ G+ + p +k ++ PGS++V+ ++   G  
     ah06448   475 NTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVM 524  

                   kiFkeaGfewranGCspCiGmnd.rpDilkeavkkgDekercvsssNRNF
                   +++ ++Gf+++++GC +CiG+++++p +  ea+ +gD++   v+s+NRNF
     ah06448   525 PYLSQLGFDVVGYGCMTCIGNSGpLPEPVVEAITQGDLVAVGVLSGNRNF 574  

                   eGRqgangrThafLaSPalvaAaAiaG<-*
                   eGR+++n r++ +LaSP+lv A+AiaG   
     ah06448   575 EGRVHPNTRAN-YLASPPLVIAYAIAG    600  

PF00330.10.ls: domain 1 of 1, from 91 to 600: score 615.6, E = 4e-182
                   *->TlyeKildaHvvdpadqdiergtslLylRPdRvlmqdvTspqAflgL
                       +   ++  ++ +     +++ + +  ++P+Rv+ qd+T+++A++++
     ah06448    91    -VKKQDIENILHWNV---TQHKNIEVPFKPARVILQDFTGVPAVVDF 133  

                   raagrpvrrvdgdadKvsPLSPttitcDHniptqkggekkalEvDlniei
                   +a++ +v++++gd +K++P+ P+++++DH+i+++    +++l  +  +e 
     ah06448   134 AAMRDAVKKLGGDPEKINPVCPADLVIDHSIQVDFNRRADSLQKNQDLEF 183  

                   ernkeqydfLeknvkeFgvgfwgpgskrQGIvHqigLEnGftlPGlelqD
                   ern+e+++fL+++ ++F +    p+++  GI+Hq++LE++   +    qD
     ah06448   184 ERNRERFEFLKWGSQAFHNMRIIPPGS--GIIHQVNLEYLARVVFD--QD 229  

                   GeliAYPDtlVGtDSHTpthGgLGaLAfGvGgsEaEhVlAgqplelkkPK
                   G  + YPD lVGtDSHT+++ gLG L++GvGg+EaE+V++gqp++++ P 
     ah06448   230 G--YYYPDSLVGTDSHTTMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQ 277  

                   vmgikltGklngGitaKDvILkviglltvkGGTGkvVEffGegiddLSme
                   v+g  l Gk+ + +t++D++L+++  l+  G++Gk+VEffG+g++ LS +
     ah06448   278 VIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLSIA 327  

                   gRaTICNMaiEiGAtaGlfppDettfkYlkgrgrapkaeeadeavakwkt
                   +RaTI+NM +E+GAta +fp+De+ + Yl  +gr+++  +  +++  + +
     ah06448   328 DRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVG 377  

                   LksDkdAne...EPqyDkvveldlsdiePsvtGPttPqdavpiselvpep
                   + +D   n+++++P +++vveldl+++ P   GP++Pqd+v++s++++++
     ah06448   378 MFRDF--NDpsqDPDFTQVVELDLKTVVPCCSGPKRPQDKVAVSDMKKDF 425  

                   knNvld........pvkkakaerAlaYmglwpgtqlkeikVdvafIGSCT
                   ++  l  +++ ++  v+ +     ++++  + +++l ++ V++a+I+SCT
     ah06448   426 ES-CLGakqgfkgfQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCT 474  

                   NssieDlrrAAsivkgaaaekGkklkpkvkatVvPGSeqVkataEreGLd
                   N+s++++   A++++++a++ G+ + p +k ++ PGS++V+ ++   G  
     ah06448   475 NTSNPSVMLGAGLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESGVM 524  

                   kiFkeaGfewranGCspCiGmnd.rpDilkeavkkgDekercvsssNRNF
                   +++ ++Gf+++++GC +CiG+++++p +  ea+ +gD++   v+s+NRNF
     ah06448   525 PYLSQLGFDVVGYGCMTCIGNSGpLPEPVVEAITQGDLVAVGVLSGNRNF 574  

                   eGRqgangrThafLaSPalvaAaAiaG<-*
                   eGR+++n r++ +LaSP+lv A+AiaG   
     ah06448   575 EGRVHPNTRAN-YLASPPLVIAYAIAG    600  

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