hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-00301952/chunk_1/iprscan-20080807-00301952.nocrc
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Query sequence: ah06551
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00027                                                  28.4    0.00021   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00027    1/1     295   382 ..     1    98 []    28.4  0.00021

Alignments of top-scoring domains:
SM00027: domain 1 of 1, from 295 to 382: score 28.4, E = 0.00021
                   *->eWaispedkakYdqiFrsldpdqdGtvsGaqakpiflkSgLPqtlLa
                      e+ + p+    Y +i  ++ +   G ++ a++ pi+++SgLP+ +L+
     ah06551   295    ESLV-PDA---YKKILETTMT-PTG-IDTAKLYPILMSSGLPRETLG 335  

                   kIWaLaDidkdGeLdrePEFalAmhLiyrklnGgepiPasLPpelippsk
                   +IWaLa+    G+L++e E +  + +i++ ++G   +Pa  P++l + + 
     ah06551   336 QIWALANRTTPGKLTKE-ELYTVLAMIAVTQRG---VPAMSPDALNQFPA 381  

                   r<-*
                   +   
     ah06551   382 A    382  

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