hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080807/iprscan-20080807-00584252/chunk_1/iprscan-20080807-00584252.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: aj00209 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00454.17.ls Phosphatidylinositol 3- and 4-kinase 351.1 1.7e-102 1 PF00454.17.fs Phosphatidylinositol 3- and 4-kinase 349.5 5.2e-102 1 PF00613.10.fs Phosphoinositide 3-kinase family, acce 244.5 7.8e-72 1 PF00613.10.ls Phosphoinositide 3-kinase family, acce 246.3 6e-71 1 PF00792.14.ls Phosphoinositide 3-kinase C2 180.7 3.3e-51 1 PF00792.14.fs Phosphoinositide 3-kinase C2 179.0 1.1e-50 1 PF00794.9.fs PI3-kinase family, ras-binding domain 133.3 2.7e-37 1 PF00794.9.ls PI3-kinase family, ras-binding domain 99.9 7.1e-27 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00794.9.fs 1/1 1 82 [. 32 116 .] 133.3 2.7e-37 PF00794.9.ls 1/1 1 82 [. 1 116 [] 99.9 7.1e-27 PF00792.14.ls 1/1 138 272 .. 1 179 [] 180.7 3.3e-51 PF00792.14.fs 1/1 138 272 .. 1 179 [] 179.0 1.1e-50 PF00613.10.ls 1/1 300 485 .. 1 213 [] 246.3 6e-71 PF00613.10.fs 1/1 300 485 .. 1 213 [] 244.5 7.8e-72 PF00454.17.fs 1/1 574 792 .. 1 329 [] 349.5 5.2e-102 PF00454.17.ls 1/1 574 792 .. 1 329 [] 351.1 1.7e-102 Alignments of top-scoring domains: PF00794.9.fs: domain 1 of 1, from 1 to 82: score 133.3, E = 2.7e-37 *->qqtkTltcnpnsTpesliaqaltKfakklsvltqndvtdeedYvLKV ++++T++++++++p +l+a+al+K k++v++q+ v+++edY+L+V aj00209 1 EESFTFQVSTKDVPLALMACALRK---KATVFRQPLVEQPEDYTLQV 44 cGrdEYLlgdhpLgqfeyIrnclksgrephLvLvesss<-* +Gr+EYL+g++pL+qf+yI++cl+sg +phL++v+sss aj00209 45 NGRHEYLYGSYPLCQFQYICSCLHSGLTPHLTMVHSSS 82 PF00794.9.ls: domain 1 of 1, from 1 to 82: score 99.9, E = 7.1e-27 *->astlsPeplpnKlinnkllisvhlekrvknkqqtkTltcnpnsTpes e +++T++++++++p + aj00209 1 ------------------------E-------ESFTFQVSTKDVPLA 16 liaqaltKfakklsvltqndvtdeedYvLKVcGrdEYLlgdhpLgqfeyI l+a+al+K k++v++q+ v+++edY+L+V+Gr+EYL+g++pL+qf+yI aj00209 17 LMACALRK---KATVFRQPLVEQPEDYTLQVNGRHEYLYGSYPLCQFQYI 63 rnclksgrephLvLvesss<-* ++cl+sg +phL++v+sss aj00209 64 CSCLHSGLTPHLTMVHSSS 82 PF00792.14.ls: domain 1 of 1, from 138 to 272: score 180.7, E = 3.3e-51 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn + ++l+v+++l+ hg+++Lc+ v s+s ++++ s+++W aj00209 138 ERMKLVVQAGLF--HGNEMLCKTV-SSSEVSVC--------SEPVWK 173 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkv. ++l+F+ i+i+dLPr+ArL+++ly++++k+k+++st +++skk++ aj00209 174 QRLEFD-INICDLPRMARLCFVLYAVIEKAKKARST------KKKSKKAd 216 eplGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal +p++w+nl+LFd+ k++L++G+++L++ Wps+++++++ aj00209 217 CPIAWANLMLFDY-KDQLKTGERCLYM-WPSVPDEKGELL---------- 254 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* + G+v snp++d + +l aj00209 255 -------------NPTGTVRSNPNTD--SAAAL 272 PF00792.14.fs: domain 1 of 1, from 138 to 272: score 179.0, E = 1.1e-50 *->kysdlyvecslyDghggkpLclpvqsTsykpfskSlldgffssvkWn + ++l+v+++l+ hg+++Lc+ v s+s ++++ s+++W aj00209 138 ERMKLVVQAGLF--HGNEMLCKTV-SSSEVSVC--------SEPVWK 173 ewltFprikisdLPrdArLvltlyeisgksksesstdeiKldaneskkv. ++l+F+ i+i+dLPr+ArL+++ly++++k+k+++st +++skk++ aj00209 174 QRLEFD-INICDLPRMARLCFVLYAVIEKAKKARST------KKKSKKAd 216 eplGwvnlsLFdkekgiLrqGpqlLsltWpskepdgsvptsTPGKvqlal +p++w+nl+LFd+ k++L++G+++L++ Wps+++++++ aj00209 217 CPIAWANLMLFDY-KDQLKTGERCLYM-WPSVPDEKGELL---------- 254 rdelnrLekllkkyerGdvqsnpvvdwlDfltl<-* + G+v snp++d + +l aj00209 255 -------------NPTGTVRSNPNTD--SAAAL 272 PF00613.10.ls: domain 1 of 1, from 300 to 485: score 246.3, E = 6e-71 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP + + + +e+e +l +Il + + +L ++EkdL+Wk+Rh + +P aj00209 300 ECVHV--TEEEQLQLWEILERRGSGELYEHEKDLVWKLRHEVQEHFP 344 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd +AL+ +lLl +kW++ ++va++l Ll + W+++++ ALELLd aj00209 345 EALA------RLLL-VTKWNKHEDVAQMLYLLCS--WPELPVLSALELLD 385 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS ++F+d +V ++A+k+L++ ++D+EL++YLLQLVQ+LKYE ++d+ aj00209 386 FSFPD--CHVGSFAIKSLRK-LTDDELFQYLLQLVQVLKYE----SYLDC 428 pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE L+ FLl+RAl Nr +GHf+fW+L+sE+ h + v + rFg++lE aj00209 429 ELTKFLLDRALANR-KIGHFLFWHLRSEM------HVPSV-ALRFGLILE 470 sylrecdstsleglnk<-* +y+r+ +++++ l k aj00209 471 AYCRGS-THHMKVLMK 485 PF00613.10.fs: domain 1 of 1, from 300 to 485: score 244.5, E = 7.8e-72 *->kdlkpNlnekerkeleaIlayDPlskLtaeEkdLiWkfRhysltsnP + + + +e+e +l +Il + + +L ++EkdL+Wk+Rh + +P aj00209 300 ECVHV--TEEEQLQLWEILERRGSGELYEHEKDLVWKLRHEVQEHFP 344 kALtLmCVGPKlLlLSVkWsdlsevaealsLldkRvWapidpvdALELLd +AL+ +lLl +kW++ ++va++l Ll + W+++++ ALELLd aj00209 345 EALA------RLLL-VTKWNKHEDVAQMLYLLCS--WPELPVLSALELLD 385 pkFadkteeVReYAVkcLesYasDeELlfYLLQLVQALKYEnldepfhdS ++F+d +V ++A+k+L++ ++D+EL++YLLQLVQ+LKYE ++d+ aj00209 386 FSFPD--CHVGSFAIKSLRK-LTDDELFQYLLQLVQVLKYE----SYLDC 428 pLsrFLlqRAlkNrsrlGHfFfWyLksEiYkDdeghdkdvIserFgvllE L+ FLl+RAl Nr +GHf+fW+L+sE+ h + v + rFg++lE aj00209 429 ELTKFLLDRALANR-KIGHFLFWHLRSEM------HVPSV-ALRFGLILE 470 sylrecdstsleglnk<-* +y+r+ +++++ l k aj00209 471 AYCRGS-THHMKVLMK 485 PF00454.17.fs: domain 1 of 1, from 574 to 792: score 349.5, E = 5.2e-102 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq +++ifK+GdDLr QD+l+lQ+i aj00209 574 SVGIIFKNGDDLR--QDMLTLQMI----------------------- 595 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +lm+ l+k+egld+r +t+Y ++p+g++ GlIE+v +s+t+a+i+ aj00209 596 --QLMDVLWKQEGLDLR----MTPYGCLPTGDRTGLIEVVLRSDTIANIQ 639 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt ++ ++ a ++fnk aj00209 640 LNKSNMAATAAFNK------------------------------------ 653 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc ++ll+w+++knp + ++++ a++ f++Sc aj00209 654 -----------------DALLNWLKSKNPGE----ALDR--AIEEFTLSC 680 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v++Y+LGigDRH+dNi++ +++G+lfHIDFG+++g++k+k+g+ aj00209 681 AGYCVATYVLGIGDRHSDNIMI----RESGQLFHIDFGHFLGNFKTKFGI 726 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral ++ervPF LT+ ++v++++++++ +s+ +++Fr +ce+ay +l aj00209 727 NRERVPFILTY------DFVHVIQQGKT--NNSEKFERFRGYCERAYTIL 768 RrnanlllnlLkkkAvarGelmledglpdwrs<-* Rr+ l+l+l+ +lm +glp+++ aj00209 769 RRHGLLFLHLF--------ALMRAAGLPELSC 792 PF00454.17.ls: domain 1 of 1, from 574 to 792: score 351.1, E = 1.7e-102 *->gypfifKgGdDLrsrQDelvlQligVfKPkDEEPyApnNPkgtkvsq +++ifK+GdDLr QD+l+lQ+i aj00209 574 SVGIIFKNGDDLR--QDMLTLQMI----------------------- 595 GerlmnkllkgegldrrRnlqltaYlviplgpgsGlIEwvpnsttlaeil +lm+ l+k+egld+r +t+Y ++p+g++ GlIE+v +s+t+a+i+ aj00209 596 --QLMDVLWKQEGLDLR----MTPYGCLPTGDRTGLIEVVLRSDTIANIQ 639 rtymvkkaikdfnksrffkdkkttkkleknakllkehkllqmvldrkqlt ++ ++ a ++fnk aj00209 640 LNKSNMAATAAFNK------------------------------------ 653 llekvevFeeklsntpkpgllqwFvkknpdaapyeewfeRfardnfvrSc ++ll+w+++knp + ++++ a++ f++Sc aj00209 654 -----------------DALLNWLKSKNPGE----ALDR--AIEEFTLSC 680 AgmsvldYiLGigDRHldNiLvkkndkktGklfHIDFGlcfghvkgkrgp Ag++v++Y+LGigDRH+dNi++ +++G+lfHIDFG+++g++k+k+g+ aj00209 681 AGYCVATYVLGIGDRHSDNIMI----RESGQLFHIDFGHFLGNFKTKFGI 726 kpervPFrLTrWPQaklpmveamggyiasLgpsgdeglFrelceeayral ++ervPF LT+ ++v++++++++ +s+ +++Fr +ce+ay +l aj00209 727 NRERVPFILTY------DFVHVIQQGKT--NNSEKFERFRGYCERAYTIL 768 RrnanlllnlLkkkAvarGelmledglpdwrs<-* Rr+ l+l+l+ +lm +glp+++ aj00209 769 RRHGLLFLHLF--------ALMRAAGLPELSC 792 //