hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-01152607/chunk_1/iprscan-20080807-01152607.nocrc
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Query sequence: aj00525
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00069.15.fs Protein kinase domain                          145.8    2.6e-41   1
PF00069.15.ls Protein kinase domain                          147.8    2.8e-41   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1     211   697 ..     1   287 []   145.8  2.6e-41
PF00069.15.ls   1/1     211   697 ..     1   287 []   147.8  2.8e-41

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 211 to 697: score 145.8, E = 2.6e-41
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y++++klG G f+tV+++ ++   + VA+K++k  +   +       
     aj00525   211    YHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVD--- 254  

                   lsEiqilkrLs........HpNIvrlidvfed....kdhlylVlEycegG
                     Ei++lk ++++++++++ + Iv+lid f+ ++ ++ h+++VlE +++ 
     aj00525   255 --EIKLLKCVRdsdpsdpkRETIVQLIDDFRIsgvnGVHVCMVLEVLGH- 301  

                   LrvldLfdylsetrrkgpllfsedeakkialQilrgleYLHs.ngiiHRD
                        L  ++   +++ +l  +   +k+i++Q+l gl+YLH +++iiH D
     aj00525   302 ----QLLKWII-KSNYQGL--PVPCVKSIVRQVLHGLDYLHTkCKIIHTD 344  

                   LKPeNILldnngvvda..................................
                   +KPeNILl   g+   ++   + ++ ++ + ++++++  ++ +++  +++
     aj00525   345 IKPENILLC-VGDAYIrrlaaeatewqqagapppsrsivstapqevlqtg 393  

                   ..................................................
                   + +++++++ +++++++++  +++ ++ ++ +  +  ++ ++++ + +++
     aj00525   394 klsknkrkkmrrkrkqqkrlleerlrdlqrleameaatqaedsglrldgg 443  

                   ..................................................
                   ++++++++ ++++ + ++++ ++++ ++++++ + ++++++ +++  ++ 
     aj00525   444 sgstsssgchpggaragpspassssapgggrslsagsqtsgfsgslfspa 493  

                   ..........................................flKiaDFG
                   + +  +++++++++++  +++++ + ++   ++ ++++ ++ ++KiaD G
     aj00525   494 scsilsgssnqretggllspstpfgasnllvnplepqnadkiKIKIADLG 543  

                   lAkklst.sss.lttfvGTpwYmAPEvllggngygtkvDvWSlGvilyel
                    A+   + +++ + ++  T+ Y+A Evl  g +yg+++D+WS  ++ +el
     aj00525   544 NAC---WvHKHfTEDIQ-TRQYRAVEVLI-GAEYGPPADIWSTACMAFEL 588  

                   ltGkpPFs.gev.q.ds.ldqlqlirkilgpplefdspewdsisrse.fr
                   +tG  +F ++++++  ++ d+++ i++ lg +++      +  + ++++r
     aj00525   589 ATGDYLFEpHSGeDySRdEDHIAHIVELLGDIPPAFALSGRYSREFFnRR 638  

                   .....................r.l.pnlseeakdLikkcLnkDPskRlta
                   ++ ++ ++ ++ +  +   ++ + + ++   +  ++  + ++ P+kR +a
     aj00525   639 gelrhihnlkhwglyevlmekYeWpLEQATQFSAFLLPMMEYIPEKRASA 688  

                   eeilqHPwf<-*
                   +++lqHPw+   
     aj00525   689 ADCLQHPWL    697  

PF00069.15.ls: domain 1 of 1, from 211 to 697: score 147.8, E = 2.8e-41
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      y++++klG G f+tV+++ ++   + VA+K++k  +   +       
     aj00525   211    YHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAGHYTETAVD--- 254  

                   lsEiqilkrLs........HpNIvrlidvfed....kdhlylVlEycegG
                     Ei++lk ++++++++++ + Iv+lid f+ ++ ++ h+++VlE +++ 
     aj00525   255 --EIKLLKCVRdsdpsdpkRETIVQLIDDFRIsgvnGVHVCMVLEVLGH- 301  

                   LrvldLfdylsetrrkgpllfsedeakkialQilrgleYLHs.ngiiHRD
                        L  ++   +++ +l  +   +k+i++Q+l gl+YLH +++iiH D
     aj00525   302 ----QLLKWII-KSNYQGL--PVPCVKSIVRQVLHGLDYLHTkCKIIHTD 344  

                   LKPeNILldnngvvda..................................
                   +KPeNILl   g+   ++   + ++ ++ + ++++++  ++ +++  +++
     aj00525   345 IKPENILLC-VGDAYIrrlaaeatewqqagapppsrsivstapqevlqtg 393  

                   ..................................................
                   + +++++++ +++++++++  +++ ++ ++ +  +  ++ ++++ + +++
     aj00525   394 klsknkrkkmrrkrkqqkrlleerlrdlqrleameaatqaedsglrldgg 443  

                   ..................................................
                   ++++++++ ++++ + ++++ ++++ ++++++ + ++++++ +++  ++ 
     aj00525   444 sgstsssgchpggaragpspassssapgggrslsagsqtsgfsgslfspa 493  

                   ..........................................flKiaDFG
                   + +  +++++++++++  +++++ + ++   ++ ++++ ++ ++KiaD G
     aj00525   494 scsilsgssnqretggllspstpfgasnllvnplepqnadkiKIKIADLG 543  

                   lAkklst.sss.lttfvGTpwYmAPEvllggngygtkvDvWSlGvilyel
                    A+   + +++ + ++  T+ Y+A Evl  g +yg+++D+WS  ++ +el
     aj00525   544 NAC---WvHKHfTEDIQ-TRQYRAVEVLI-GAEYGPPADIWSTACMAFEL 588  

                   ltGkpPFs.gev.q.ds.ldqlqlirkilgpplefdspewdsisrse.fr
                   +tG  +F ++++++  ++ d+++ i++ lg +++      +  + ++++r
     aj00525   589 ATGDYLFEpHSGeDySRdEDHIAHIVELLGDIPPAFALSGRYSREFFnRR 638  

                   .....................r.l.pnlseeakdLikkcLnkDPskRlta
                   ++ ++ ++ ++ +  +   ++ + + ++   +  ++  + ++ P+kR +a
     aj00525   639 gelrhihnlkhwglyevlmekYeWpLEQATQFSAFLLPMMEYIPEKRASA 688  

                   eeilqHPwf<-*
                   +++lqHPw+   
     aj00525   689 ADCLQHPWL    697  

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