hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-19371893/chunk_1/iprscan-20090617-19371893.nocrc
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Query sequence: aj00720
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00834 ae: anion exchange protein                    2273.1          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00834   1/1     327  1243 ..     1   987 []  2273.1        0

Alignments of top-scoring domains:
TIGR00834: domain 1 of 1, from 327 to 1243: score 2273.1, E = 0
                   *->fvelneLlldsrnQEpeWrETARWikfEEdveeggerWGkPHVatLs
                      fvelneLlld +nQEp+WrETARWikfEEdvee++erWGkPHVa+Ls
     aj00720   327    FVELNELLLD-KNQEPQWRETARWIKFEEDVEEETERWGKPHVASLS 372  

                   fhSLlELRrciakGavLLDLaatsLpgvankvvDqliysgqirpedRdev
                   f+SLlELRr++a+GavLLDL++++Lpgva++vv+q+++s+qi++edR++v
     aj00720   373 FRSLLELRRTLAHGAVLLDLDQQTLPGVAHQVVEQMVISDQIKAEDRANV 422  

                   lraLLlKHsHpseakklgaGGekGGflsravsqssiGktlshhh.dasei
                   lraLLlKHsHps++k+++        ++r++s++s+G++l+hhh+++ e+
     aj00720   423 LRALLLKHSHPSDEKDFS--------FPRNISAGSLGSLLGHHHgQGAES 464  

                   epkpenPvisgagaPllphdrltemqllsvpkdissrPeksklklkllkK
                   +p++++P+++g+++++l+++r++e +++++p++ ++r +ksk++lkll+K
     aj00720   465 DPHVTEPLMGGVPETRLEVERERELPPPAPPAG-ITR-SKSKHELKLLEK 512  

                   lPedaEAtlVLVGevdFLekPalAFVRLkeAveLeavlEVPVPvRFlFvL
                   +Pe+aEAt+VLVG+v+FL++P++AFVRL+eAveL+avlEVPVPvRFlF+L
     aj00720   513 IPENAEATVVLVGCVEFLSRPTMAFVRLREAVELDAVLEVPVPVRFLFLL 562  

                   LGPsgpgvdYhEiGRAiATLMsDrvFhdaAYlAddRddLLagIdeFLDcs
                   LGPs++++dYhEiGR+i+TLMsD++Fh+aAYlAd+R+dLL++I++FLDcs
     aj00720   563 LGPSSANMDYHEIGRSISTLMSDKQFHEAAYLADEREDLLTAINAFLDCS 612  

                   iVLPPtEvdseirLepliplQrellRkRyeqpstvrgpenvtvggglee.
                   +VLPP+Ev++e++L++++++Qr++l+kR+eq++      +++ g+gle++
     aj00720   613 VVLPPSEVQGEELLRSVAHFQRQMLKKREEQGR------LLPTGAGLEPk 656  

                   .akeka.LedggsegphgDDdpLqRTGrlFGGLIrDIkRRYPhYlSDftD
                   +a++ka L++++ +g+++DD pL+RTGr+FGGLIrD++RRYPhYlSDf+D
     aj00720   657 sAQDKAlLQMVEAAGAAEDD-PLRRTGRPFGGLIRDVRRRYPHYLSDFRD 705  

                   ALnpQcLAAViFIYFAALSPAITFGGLLGEKTenmmGVsElllSTAVqGv
                   AL+pQcLAAViFIYFAALSPAITFGGLLGEKT++++GVsEl++STA+qGv
     aj00720   706 ALDPQCLAAVIFIYFAALSPAITFGGLLGEKTQDLIGVSELIMSTALQGV 755  

                   iFaLlaAQPLLVvGFSGPLLVFEeafFsFCksngLEYlvGRvWiGlWlvl
                   +F+Ll+AQPLLV+GFSGPLLVFEeafFsFC+sn LEYlvGRvWiG+Wlv+
     aj00720   756 VFCLLGAQPLLVIGFSGPLLVFEEAFFSFCSSNHLEYLVGRVWIGFWLVF 805  

                   lvlllVAtEGSfLVryiSRFTQEIFSfLISLIFIYETFsKLiKIfqehPi
                   l+ll+VA+EGSfLVr++SRFTQEIF+fLISLIFIYETF+KL+KIfqehP 
     aj00720   806 LALLMVALEGSFLVRFVSRFTQEIFAFLISLIFIYETFYKLVKIFQEHP- 854  

                   isyLqqfYetlfsCscvppkpskpsvsndttlArevlkstsltdayndtt
                      L+++++++    ++ +  ++ +++++   Ar                
     aj00720   855 ---LHGCSASNS---SEVD--GGENMTWA--GAR---------------- 878  

                   iDytallekdcskiggslggnkcralPNtALLSLvLmlGTFflAmfLRKF
                         l + ++++ g++g+ k+r++PNtALLSLvLm+GTFf+A+fLRKF
     aj00720   879 ----PTLGPGNRSLAGQSGQGKPRGQPNTALLSLVLMAGTFFIAFFLRKF 924  

                   KNSryfPGkvRRlIGDFGVpISIliMvlVDifIeDtyTQKLsVPsglkVT
                   KNSr+fPG++RR+IGDFGVpI+IliMvlVD++IeDtyTQKLsVPsg++VT
     aj00720   925 KNSRFFPGRIRRVIGDFGVPIAILIMVLVDYSIEDTYTQKLSVPSGFSVT 974  

                   npnaRGWFIpPLGentpFPwWmmvAaalPALLVfILIFlEtQITTLIVSk
                   +p +RGW+I+PLGe++pFP+WmmvA++lPA LVfILIF+EtQITTLI+Sk
     aj00720   975 APEKRGWVINPLGEKSPFPVWMMVASLLPAILVFILIFMETQITTLIISK 1024 

                   kERKLvKGSGFHLDLLlvvamggiaaLfGLPWLsAATVrSvTHaNALTVm
                   kER+L+KGSGFHLDLLl+vamggi+aLfGLPWL+AATVrSvTHaNALTVm
     aj00720  1025 KERMLQKGSGFHLDLLLIVAMGGICALFGLPWLAAATVRSVTHANALTVM 1074 

                   skasaPGekaqIqeVrEQRvtGlLVavLvGLSiLmepILkrIPLaVLFGI
                   ska+aPG+k++IqeV+EQRvtGlLVa+LvGLSi+++++L++IPLaVLFGI
     aj00720  1075 SKAVAPGDKPKIQEVKEQRVTGLLVALLVGLSIVIGDLLRQIPLAVLFGI 1124 

                   FLYMGVTSLsGIQLfDRllLLlmPpKYhPdvpYvrrVktwRmHLFTliQi
                   FLYMGVTSL+GIQ+++Rl+LLlmPpK+hPdv+Yv++V+t RmHLFT++Q+
     aj00720  1125 FLYMGVTSLNGIQFYERLHLLLMPPKHHPDVTYVKKVRTLRMHLFTALQL 1174 

                   lCLALLWvVKStkaASLafPfvLiLtVPLRrlllprlFterELkcLDDvi
                   lCLALLW+V+St aASLafPf+LiLtVPLR+++l+r+Ft+rE+kcLD   
     aj00720  1175 LCLALLWAVMST-AASLAFPFILILTVPLRMVVLTRIFTDREMKCLD--- 1220 

                   PekdkkKkeDAkvkfdEekveldsdGeDeyntyaeKveaEvpmP<-*
                          +++A+++fdE       +G+Deyn        E+pmP   
     aj00720  1221 -------ANEAEPVFDER------EGVDEYN--------EMPMP    1243 

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