hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-01570024/chunk_1/iprscan-20080807-01570024.nocrc
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Query sequence: aj00807
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00211                                                  59.5    4.3e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00211    1/1     326   375 ..     1    58 []    59.5  4.3e-13

Alignments of top-scoring domains:
SM00211: domain 1 of 1, from 326 to 375: score 59.5, E = 4.3e-13
                   *->iPqCdedGnYepvQCdgssggkRGqCWCVDpasGreipGtRtepGia
                      ++qCd++G+Y++ Q d++s    G+ +CVD  +Gr++p+ +te   a
     aj00807   326    GLQCDQNGQYRASQKDRGS----GKAFCVD-GEGRRLPWWETE---A 364  

                   pggdpdCpspc<-*
                   p  d +C+ ++   
     aj00807   365 PLEDSQCLMMQ    375  

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