hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-02440063/chunk_1/iprscan-20080807-02440063.nocrc
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Query sequence: ak00083
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00834 ae: anion exchange protein                    1933.2          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00834   1/1     290  1151 ..     1   987 []  1933.2        0

Alignments of top-scoring domains:
TIGR00834: domain 1 of 1, from 290 to 1151: score 1933.2, E = 0
                   *->fvelneLlldsrnQEpeWrETARWikfEEdveeggerWGkPHVatLs
                        e +  +l s                  d+        k+H     
     ak00083   290    TDEAEAQMLGSA-----------------DLDD-----MKSH----- 309  

                   fhSLlELRrciakGavLLDLaatsLpgvankvvDqliysgqirpedRdev
                                      L+ +  pgv  ++v +   +   r     +v
     ak00083   310 ------------------RLEDN--PGVRRHLVKKPSRTQGGRGSP--SV 337  

                   lraLLlKHsHpseakklgaGGekGGflsravsqssiGktlshhh.dasei
                   lr+LLlKHsHp+++k++g+       ++r++s+ss++++l++hh+++s++
     ak00083   338 LRTLLLKHSHPNDDKDSGF-------FPRNPSSSSMNSVLGNHHpTPSHG 380  

                   epkpenPvis...gagaPllphdrltemqllsvpkdissrPeksklklkl
                    p++++P+++++ g++aPl+phd+++++++l++p+++++r +ks   lkl
     ak00083   381 -PDGAVPTMAddlGEPAPLWPHDPDAKEKPLHMPGGDGHR-GKS---LKL 425  

                   lkKlPedaEAtlVLVGevdFLekPalAFVRLkeAveLeavlEVPVPvRFl
                   l+K+PedaEAt+VLVG+v+FLe+Pa+AFVRL+eAv+Le+vlEVPVPvRFl
     ak00083   426 LEKIPEDAEATVVLVGCVPFLEQPAAAFVRLNEAVLLESVLEVPVPVRFL 475  

                   FvLLGPsgpgvdYhEiGRAiATLMsDrvFhdaAYlAddRddLLagIdeFL
                   Fv+LGPs++++dYhE+GR+iATLMsD++Fh+aAY+AddR+dLL++I+eFL
     ak00083   476 FVMLGPSHTSTDYHELGRSIATLMSDKLFHEAAYQADDRQDLLSAISEFL 525  

                   DcsiVLPPtEvdseirLepliplQrellRkRyeqpstvrgpenvtvgggl
                   D+siV+PP+Ev+++++L++++++QrellRkR+e+++t++  e++t+gg++
     ak00083   526 DGSIVIPPSEVEGRDLLRSVAAFQRELLRKRREREQTKV--EMTTRGGYT 573  

                   eeakekaLedggsegphgDDdpLqRTGrlFGGLIrDIkRRYPhYlSDftD
                   +++ke++Le ggse++ +DD pL+RTG++FGGL+rD++RRYPhY+SD++D
     ak00083   574 APGKELSLELGGSEATPEDD-PLLRTGSVFGGLVRDVRRRYPHYPSDLRD 622  

                   ALnpQcLAAViFIYFAALSPAITFGGLLGEKTenmmGVsElllSTAVqGv
                   AL++Qc+AAV+FIYFAALSPAITFGGLLGEKTe++mGVsEl++STAV+Gv
     ak00083   623 ALHSQCVAAVLFIYFAALSPAITFGGLLGEKTEGLMGVSELIVSTAVLGV 672  

                   iFaLlaAQPLLVvGFSGPLLVFEeafFsFCksngLEYlvGRvWiGlWlvl
                   +F+Ll+AQPLLVvGFSGPLLVFEeafF+FC++++LEYl+GRvW+GlWlv+
     ak00083   673 LFSLLGAQPLLVVGFSGPLLVFEEAFFKFCRAQDLEYLTGRVWVGLWLVV 722  

                   lvlllVAtEGSfLVryiSRFTQEIFSfLISLIFIYETFsKLiKIfqehPi
                   +vl+lVA+EGSfLVryiS+FTQEIF+fLISLIFIYETF+KL+K+f+ehP 
     ak00083   723 FVLALVAAEGSFLVRYISPFTQEIFAFLISLIFIYETFYKLYKVFTEHP- 771  

                   isyLqqfYetlfsCscvppkpskpsvsndttlArevlkstsltdayndtt
                      L +fY+++    +++++ ++                           
     ak00083   772 ---LLPFYPPEG---ALEGSLAA--------------------------- 788  

                   iDytallekdcskiggslggnkcralPNtALLSLvLmlGTFflAmfLRKF
                        +le++ s++++++g++++r++PNtALLSL+LmlGTFf+A+fLRKF
     ak00083   789 -----GLEPNGSALPPTEGPPSPRNQPNTALLSLILMLGTFFIAFFLRKF 833  

                   KNSryfPGkvRRlIGDFGVpISIliMvlVDifIeDtyTQKLsVPsglkVT
                   +NSr+++Gk+RR+IGDFG+pISIl+MvlVD++I+DtyTQKL+VP+gl+VT
     ak00083   834 RNSRFLGGKARRIIGDFGIPISILVMVLVDYSITDTYTQKLTVPTGLSVT 883  

                   npnaRGWFIpPLGentpFPwWmmvAaalPALLVfILIFlEtQITTLIVSk
                   +p++R+WFIpPLG+++pFP+WmmvAaa+PALLV+ILIF+EtQIT+LIVS+
     ak00083   884 SPDKRSWFIPPLGSARPFPPWMMVAAAVPALLVLILIFMETQITALIVSQ 933  

                   kERKLvKGSGFHLDLLlvvamggiaaLfGLPWLsAATVrSvTHaNALTVm
                   k+R+L+KGSGFHLDLLl++++gg+++LfGLPWL+AATVrSvTH+NALTVm
     ak00083   934 KARRLLKGSGFHLDLLLIGSLGGLCGLFGLPWLTAATVRSVTHVNALTVM 983  

                   skasaPGekaqIqeVrEQRvtGlLVavLvGLSiLmepILkrIPLaVLFGI
                   ++a+aPG+k+qIqeVrEQRvtG+L+a+LvGLSi+m+++L+rIPLaVLFGI
     ak00083   984 RTAIAPGDKPQIQEVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGI 1033 

                   FLYMGVTSLsGIQLfDRllLLlmPpKYhPdvpYvrrVktwRmHLFTliQi
                   FLYMGVTSLsGIQL++RllL+lmP+K+hP++pYv++VktwRmHLFT+iQ+
     ak00083  1034 FLYMGVTSLSGIQLSQRLLLILMPAKHHPEQPYVTKVKTWRMHLFTCIQL 1083 

                   lCLALLWvVKStkaASLafPfvLiLtVPLRrlllprlFterELkcLDDvi
                   +C+ALLWvVKSt aASLafPf+L+LtVPLR++llprlF++rEL++LD   
     ak00083  1084 GCIALLWVVKST-AASLAFPFLLLLTVPLRHCLLPRLFQDRELQALD--- 1129 

                   PekdkkKkeDAkvkfdEekveldsdGeDeyntyaeKveaEvpmP<-*
                          +eDA+++fdE       dG+Deyn        E++mP   
     ak00083  1130 -------SEDAEPNFDE-------DGQDEYN--------ELHMP    1151 

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