hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-17443597/chunk_1/iprscan-20090618-17443597.nocrc
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Query sequence: bf00036
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00146                                                 435.0     4e-126   1
SM00802                                                 154.4    1.2e-41   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00802      1/1    1126  1232 ..     1   115 []   154.4  1.2e-41
SM00146      1/1    2330  2640 ..     1   336 []   435.0   4e-126

Alignments of top-scoring domains:
SM00802: domain 1 of 1, from 1126 to 1232: score 154.4, E = 1.2e-41
                   *->ladfLkehfLGilaqfsnilhdssGkkpveEKkraLrsigfLikllg
                      +ad+L++++LGila+f+++l++ss    +e+Kk+aL+s++ L+kl+g
     bf00036  1126    MADYLQPKLLGILAFFNMQLLSSS--VGIEDKKMALNSLMSLMKLMG 1170 

                   gkhissalPQliaImacLqsaLeipe.LreaalrcWhvliktLkeVSpee
                   +kh+ss++++   +m++L+++L+ +++++e+++r+W +++++L++   + 
     bf00036  1171 PKHVSSVRVK---MMTTLRTGLRFKDdFPELCCRAWDCFVRCLDH---AC 1214 

                   Ylgplldqifaallplwpt<-*
                    lg+ll+++++allpl++    
     bf00036  1215 -LGSLLSHVIVALLPLIHI    1232 

SM00146: domain 1 of 1, from 2330 to 2640: score 435.0, E = 4e-126
                   *->avIfKggDDLRQDalvlQllrlmdklLkkdsetrrldLhlrpYkvlp
                       +++K++DDLR+D++ +++++l++k+L+kd+e+rr+ Lh+r+Y+v+p
     bf00036  2330    IMMCKPKDDLRKDCRLMEFNSLINKCLRKDAESRRRELHIRTYAVIP 2376 

                   tgpksGliEvvpnsetlheIlkelrkkkkipldykqlfmldmlvaeieka
                   +++++G+iE+v+n++ l++Il +l+k+k++++++k+l++           
     bf00036  2377 LNDECGIIEWVNNTAGLRPILTKLYKEKGVYMTGKELRQ----------- 2415 

                   qyptitlakakkkalrykhatlleklkvfegatsafkppvLydwfkekfp
                                ++ +k a+l+eklkvf++ + + +pp++++wf+++fp
     bf00036  2416 -------------CMLPKSAALSEKLKVFREFLLPRHPPIFHEWFLRTFP 2452 

                   dpneiyfeardnFtrScAgySvvtYiLGlGDRHndNImldrktGhlfHID
                   dp  +++++r+ ++rS+A++S+v+YiLGlGDRH++NI++d  tG+++H+D
     bf00036  2453 DP-TSWYSSRSAYCRSTAVMSMVGYILGLGDRHGENILFDSLTGECVHVD 2501 

                   FGfilgngpklpgfklfgRErvPFrLTpemvdvmGgGgkpsgvfglFrsl
                   F++++++g++++++     E vPFrLT++mv++mG    p+g +glFr+ 
     bf00036  2502 FNCLFNKGETFEVP-----EIVPFRLTHNMVNGMG----PMGTEGLFRRA 2542 

                   CerayralRknsnllmnllelMlsdglmpewrsg..ekdikylrerlrld
                   Ce ++r++R +++ lm++l ++l+d+l  ew++  +++++++l+e+ ++ 
     bf00036  2543 CEVTMRLMRDQREPLMSVLKTFLHDPL-VEWSKPvkGHSKAPLNETGEVV 2591 

                   v.......lsdeeaaeyfkkt.ektkliessleslttrlndlfhllaql<
                   +++ +++ l  e++++ + kt++++  ++ s+e++ + l++++ + + l 
     bf00036  2592 NekakthvLDIEQRLQGVIKTrNRVTGLPLSIEGHVHYLIQEATDENLL  2640 

                   -*
                     
     bf00036     -    -    

//