hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-04341934/chunk_1/iprscan-20080807-04341934.nocrc
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Query sequence: bh00154
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00249                                                  36.0    5.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00249    1/1      60   119 ..     1    39 []    36.0  5.2e-06

Alignments of top-scoring domains:
SM00249: domain 1 of 1, from 60 to 119: score 36.0, E = 5.2e-06
                   *->yC.vCgk.........g.llqCd.kgCdrwyHv.Clgpple......
                      +C +C++ +++++  +g ++ C+++gC++++Hv+C++++++  ++++
     bh00154    60    TCyICDEqgreskaatGaCMTCNkHGCRQAFHVtCAQFAGLlceeeg 106  

                   .epdg.wyCprCk<-*
                   +  d   yC  Ck   
     bh00154   107 nGADNvQYCGYCK    119  

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