hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-05055276/chunk_1/iprscan-20080807-05055276.nocrc
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Query sequence: bh00260
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00155.11.fs Aminotransferase class I and II            72.3    4.7e-20   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00155.11.fs   1/1      93   256 ..     1   180 [.    72.3  4.7e-20

Alignments of top-scoring domains:
PF00155.11.fs: domain 1 of 1, from 93 to 256: score 72.3, E = 4.7e-20
                   *->kdkinLgsneylgdagkpptlpavakAekeayGcteGalaggtlnlY
                      k++in++s ++lg+  +p  ++a+a A  ++yG     + +g++ +Y
     bh00260    93    KECINFASFNFLGLLDNP-RVKAAALASLKKYG----VGTCGPRGFY 134  

                   gptdGlpelrealAkflggarspvlklkreaavvfssGagaliealifll
                   g++d++ +l+  lAkf++           e a+++s G+  + +a+++  
     bh00260   135 GTFDVHLDLEDLLAKFMK----------TEEAIIYSYGFATIASAIPAYS 174  

                   rlnpgdailvpaPtyasyirifrlaggevvryplyssndfhlDfdaLeaa
                   +  +gd ++v++    ++  ++++++  +  ++       h+D+ +Le++
     bh00260   175 K--RGDIVFVDRAACFAIQKGLQASRSDIKLFK-------HNDMADLERL 215  

                   lkeapegni........ktKvvlhtsPhNPtGtvltleele<-*
                   lke+   +++++++ +  ++++++++ +  tGt+++l+el+   
     bh00260   216 LKEQEIEDQknprkarvTRRFIVVEGLYMNTGTICPLPELV    256  

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