# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obh00352.fasta.nr -Q bh00352.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bh00352, 189 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6823802 sequences Expectation_n fit: rho(ln(x))= 4.7702+/-0.000183; mu= 8.7723+/- 0.010 mean_var=70.1377+/-13.307, 0's: 38 Z-trim: 50 B-trim: 0 in 0/68 Lambda= 0.153143 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089104|dbj|BAD92996.1| tyrosine 3-monooxygena ( 189) 1271 289.3 2e-76 gi|66347208|emb|CAI95661.1| tyrosine 3-monooxygena ( 100) 628 147.0 7.2e-34 gi|123240357|emb|CAM20760.1| tyrosine 3-monooxygen ( 159) 628 147.2 1e-33 gi|148674410|gb|EDL06357.1| tyrosine 3-monooxygena ( 245) 629 147.6 1.2e-33 gi|109091960|ref|XP_001109676.1| PREDICTED: tyrosi ( 245) 629 147.6 1.2e-33 gi|119596301|gb|EAW75895.1| tyrosine 3-monooxygena ( 212) 628 147.3 1.3e-33 gi|67464627|pdb|2BQ0|A Chain A, 14-3-3 Protein Bet ( 245) 628 147.3 1.4e-33 gi|74191394|dbj|BAE30278.1| unnamed protein produc ( 246) 628 147.3 1.4e-33 gi|148841384|sp|A4K2U9.1|1433B_PONAB 14-3-3 protei ( 246) 628 147.3 1.4e-33 gi|194044626|ref|XP_001927289.1| PREDICTED: simila ( 246) 628 147.3 1.4e-33 gi|18202836|sp|Q9CQV8|1433B_MOUSE 14-3-3 protein b ( 246) 628 147.3 1.4e-33 gi|90076742|dbj|BAE88051.1| unnamed protein produc ( 246) 628 147.3 1.4e-33 gi|90080786|dbj|BAE89874.1| unnamed protein produc ( 246) 628 147.3 1.4e-33 gi|71153774|sp|P68250|1433B_BOVIN 14-3-3 protein b ( 246) 628 147.3 1.4e-33 gi|149575335|ref|XP_001518806.1| PREDICTED: simila ( 277) 626 147.0 2.1e-33 gi|73992050|ref|XP_866284.1| PREDICTED: similar to ( 104) 621 145.5 2.2e-33 gi|149733297|ref|XP_001503158.1| PREDICTED: simila ( 246) 625 146.7 2.2e-33 gi|149042982|gb|EDL96556.1| tyrosine 3-monooxygena ( 180) 622 145.9 2.8e-33 gi|1345591|sp|P35213|1433B_RAT 14-3-3 protein beta ( 246) 622 146.0 3.5e-33 gi|1585294|prf||2124382A RNH-1/14-3-3 protein ( 246) 622 146.0 3.5e-33 gi|126302931|ref|XP_001369909.1| PREDICTED: simila ( 246) 619 145.4 5.5e-33 gi|3065925|gb|AAC14343.1| 14-3-3 protein beta [Mus ( 246) 617 144.9 7.5e-33 gi|73992048|ref|XP_852754.1| PREDICTED: similar to ( 244) 616 144.7 8.7e-33 gi|2852383|gb|AAC02090.1| 14-3-3 protein beta [Bos ( 244) 616 144.7 8.7e-33 gi|82197872|sp|Q5ZLQ6|1433B_CHICK 14-3-3 protein b ( 244) 613 144.0 1.4e-32 gi|82203881|sp|Q6UFZ9|143B1_ONCMY 14-3-3 protein b ( 244) 568 134.1 1.4e-29 gi|82592598|sp|Q5PRD0|143B1_BRARE 14-3-3 protein b ( 244) 558 131.9 6.3e-29 gi|56269288|gb|AAH86710.1| Ywhab1 protein [Danio r ( 290) 558 131.9 7.1e-29 gi|82208333|sp|Q7T356|143B2_BRARE 14-3-3 protein b ( 242) 557 131.7 7.3e-29 gi|82089139|sp|Q6UFZ8|143B2_ONCMY 14-3-3 protein b ( 244) 556 131.4 8.5e-29 gi|50844461|gb|AAT84347.1| 14-3-3 protein [Oreochr ( 244) 555 131.2 1e-28 gi|253706|gb|AAB22943.1| 14-3-3 protein zeta chain ( 245) 555 131.2 1e-28 gi|26341272|dbj|BAC34298.1| unnamed protein produc ( 117) 549 129.6 1.5e-28 gi|47211585|emb|CAF91857.1| unnamed protein produc ( 141) 549 129.7 1.7e-28 gi|47223168|emb|CAG11303.1| unnamed protein produc ( 216) 551 130.3 1.7e-28 gi|192988247|pdb|2V7D|A Chain A, 14-3-3 Protein Ze ( 247) 551 130.3 1.9e-28 gi|148691731|gb|EDL23678.1| mCG48999 [Mus musculus ( 180) 549 129.8 2e-28 gi|83754467|pdb|2C1J|A Chain A, Molecular Basis Fo ( 258) 550 130.1 2.2e-28 gi|149269348|ref|XP_001477753.1| PREDICTED: simila ( 211) 549 129.8 2.2e-28 gi|73974186|ref|XP_857856.1| PREDICTED: similar to ( 229) 549 129.9 2.4e-28 gi|161172138|pdb|2O02|A Chain A, Phosphorylation I ( 230) 549 129.9 2.4e-28 gi|1526539|dbj|BAA13421.1| 14-3-3 zeta [Mus muscul ( 245) 549 129.9 2.5e-28 gi|74187552|dbj|BAE36724.1| unnamed protein produc ( 245) 549 129.9 2.5e-28 gi|68565122|sp|Q5R651.1|1433Z_PONAB 14-3-3 protein ( 245) 549 129.9 2.5e-28 gi|52000883|sp|P63102|1433Z_RAT 14-3-3 protein zet ( 245) 549 129.9 2.5e-28 gi|112696|sp|P29361|1433Z_SHEEP 14-3-3 protein zet ( 245) 549 129.9 2.5e-28 gi|73974184|ref|XP_857819.1| PREDICTED: similar to ( 254) 549 129.9 2.6e-28 gi|148676868|gb|EDL08815.1| tyrosine 3-monooxygena ( 256) 549 129.9 2.6e-28 gi|49119653|gb|AAH73141.1| YWHAZ protein [Homo sap ( 265) 549 129.9 2.7e-28 gi|1051270|gb|AAA80544.1| 14-3-3 zeta isoform ( 245) 548 129.7 2.9e-28 >>gi|62089104|dbj|BAD92996.1| tyrosine 3-monooxygenase/t (189 aa) initn: 1271 init1: 1271 opt: 1271 Z-score: 1527.3 bits: 289.3 E(): 2e-76 Smith-Waterman score: 1271; 100.000% identity (100.000% similar) in 189 aa overlap (1-189:1-189) 10 20 30 40 50 60 bh0035 ANSHDAGSLGRVSRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ANSHDAGSLGRVSRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQA 10 20 30 40 50 60 70 80 90 100 110 120 bh0035 ERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQ 70 80 90 100 110 120 130 140 150 160 170 180 bh0035 QMGKEYREKIEAELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QMGKEYREKIEAELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILE 130 140 150 160 170 180 bh0035 SCQVFTTNF ::::::::: gi|620 SCQVFTTNF >>gi|66347208|emb|CAI95661.1| tyrosine 3-monooxygenase/t (100 aa) initn: 628 init1: 628 opt: 628 Z-score: 763.2 bits: 147.0 E(): 7.2e-34 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|663 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|663 ELQDICNDVL 100 >>gi|123240357|emb|CAM20760.1| tyrosine 3-monooxygenase/ (159 aa) initn: 628 init1: 628 opt: 628 Z-score: 760.5 bits: 147.2 E(): 1e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|123 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|123 ELQDICNDVLELLDKYLILNATQAESKVFYLKMKGDYFRYLSEVASGENKQTTVSNSQQA 100 110 120 130 140 150 >>gi|148674410|gb|EDL06357.1| tyrosine 3-monooxygenase/t (245 aa) initn: 629 init1: 629 opt: 629 Z-score: 759.3 bits: 147.6 E(): 1.2e-33 Smith-Waterman score: 629; 99.010% identity (100.000% similar) in 101 aa overlap (43-143:1-101) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|148 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF ::::::::::. gi|148 ELQDICNDVLLLDKYLILNATQAESKVFYLKMKGDYFRYLSEVASGENKQTTVSNSQQAY 100 110 120 130 140 150 >>gi|109091960|ref|XP_001109676.1| PREDICTED: tyrosine 3 (245 aa) initn: 629 init1: 629 opt: 629 Z-score: 759.3 bits: 147.6 E(): 1.2e-33 Smith-Waterman score: 629; 99.010% identity (100.000% similar) in 101 aa overlap (43-143:1-101) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|109 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF ::::::::::. gi|109 ELQDICNDVLLLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAY 100 110 120 130 140 150 >>gi|119596301|gb|EAW75895.1| tyrosine 3-monooxygenase/t (212 aa) initn: 628 init1: 628 opt: 628 Z-score: 758.9 bits: 147.3 E(): 1.3e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|119 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|119 ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQA 100 110 120 130 140 150 >>gi|67464627|pdb|2BQ0|A Chain A, 14-3-3 Protein Beta (H (245 aa) initn: 628 init1: 628 opt: 628 Z-score: 758.1 bits: 147.3 E(): 1.4e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|674 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|674 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|674 ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQA 100 110 120 130 140 150 >>gi|74191394|dbj|BAE30278.1| unnamed protein product [M (246 aa) initn: 628 init1: 628 opt: 628 Z-score: 758.0 bits: 147.3 E(): 1.4e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|741 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|741 ELQDICNDVLELLDKYLILNATQAESKVFYLKMKGYYFRYLSEVASGENKQTTVSNSQQA 100 110 120 130 140 150 >>gi|148841384|sp|A4K2U9.1|1433B_PONAB 14-3-3 protein be (246 aa) initn: 628 init1: 628 opt: 628 Z-score: 758.0 bits: 147.3 E(): 1.4e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|148 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|148 ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQA 100 110 120 130 140 150 >>gi|194044626|ref|XP_001927289.1| PREDICTED: similar to (246 aa) initn: 628 init1: 628 opt: 628 Z-score: 758.0 bits: 147.3 E(): 1.4e-33 Smith-Waterman score: 628; 100.000% identity (100.000% similar) in 100 aa overlap (43-142:1-100) 20 30 40 50 60 70 bh0035 SRDLGRYKKCILPIRLWIEKQEEHWTWSQGMTMDKSELVQKAKLAEQAERYDDMAAAMKA :::::::::::::::::::::::::::::: gi|194 MTMDKSELVQKAKLAEQAERYDDMAAAMKA 10 20 30 80 90 100 110 120 130 bh0035 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEA 40 50 60 70 80 90 140 150 160 170 180 bh0035 ELQDICNDVLVRGQCFCFEQWFLNSINLMYKCRLSKQLMRERCLNILESCQVFTTNF :::::::::: gi|194 ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQA 100 110 120 130 140 150 189 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 05:10:01 2008 done: Thu Aug 7 05:12:52 2008 Total Scan time: 614.980 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]