hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-05125301/chunk_1/iprscan-20080807-05125301.nocrc
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Query sequence: bh00352
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00244.10.fs 14-3-3 protein                                 173.8      4e-49   1
PF00244.10.ls 14-3-3 protein                                  47.2    5.1e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00244.10.fs   1/1      47   142 ..     1    98 [.   173.8    4e-49
PF00244.10.ls   1/1      47   188 ..     1   236 []    47.2  5.1e-11

Alignments of top-scoring domains:
PF00244.10.fs: domain 1 of 1, from 47 to 142: score 173.8, E = 4e-49
                   *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK
                      + elv++akLaeqaEry++m++amk+v+e+g+eLs+EeRnLlsvaYK
     bh00352    47    KSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK 93   

                   nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv
                   nvvGarR+sWR+issiEqK+e   nekk+++ keYRek+E+eL++ic+dv
     bh00352    94 NVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDV 141  

                   L<-*
                   L   
     bh00352   142 L    142  

PF00244.10.ls: domain 1 of 1, from 47 to 188: score 47.2, E = 5.1e-11
                   *->reelvylakLaeqaEryeemveamkkvaelgeeLsvEeRnLlsvaYK
                      + elv++akLaeqaEry++m++amk+v+e+g+eLs+EeRnLlsvaYK
     bh00352    47    KSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYK 93   

                   nvvGarRasWRiissiEqKeeskgnekkvelikeYRekvEkeLskicddv
                   nvvGarR+sWR+issiEqK+e   nekk+++ keYRek+E+eL++ic+dv
     bh00352    94 NVVGARRSSWRVISSIEQKTER--NEKKQQMGKEYREKIEAELQDICNDV 141  

                   LklldkhLipkattaeskvFylKmkGDYyRYlaEfatgeerkeaadksle
                   L                      ++G  + +          +   ++   
     bh00352   142 L----------------------VRGQCFCF---------EQWFLNSINL 160  

                   aYkeAsdiakaelaPthPiRLGLALnFsvFyyeilnspdkAcqLAKqaFd
                    Yk                                      c+L Kq   
     bh00352   161 MYK--------------------------------------CRLSKQLMR 172  

                   eAiaeLdtlsEesYKdstLimqLLRDnLtLWtsdaqdee<-*
                   e   ++                       L   ++   +   
     bh00352   173 ERCLNI-----------------------LESCQVFTTN    188  

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