hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-20164575/chunk_1/iprscan-20090617-20164575.nocrc
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Query sequence: bj00162
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00389                                                  48.4    9.7e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00389    1/1     678   741 ..     1    63 []    48.4  9.7e-10

Alignments of top-scoring domains:
SM00389: domain 1 of 1, from 678 to 741: score 48.4, E = 9.7e-10
                   *->krrkRtsftpeQleeLEkeFeknp.YPsreereeLAkeLgLterqVk
                      k r+Rt ++ e+l +L+ + ++   YP++e ++ L+++L L++  + 
     bj00162   678    KTRPRTKISVEALGILQSFIQDVGlYPDEEAIQTLSAQLDLPKYTII 724  

                   vWFQNRRakwkrqekkk<-*
                     FQN+R+ +k++ k k   
     bj00162   725 KFFQNQRYYLKHHGKLK    741  

//