hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-06093172/chunk_1/iprscan-20080807-06093172.nocrc
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Query sequence: bj00338
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00102.17.ls Protein-tyrosine phosphatase              867.5   5.8e-258   2
PF00102.17.fs Protein-tyrosine phosphatase              863.9   7.1e-257   2
PF00782.11.fs Dual specificity phosphatase, catalytic    16.0    0.00028   2

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00102.17.fs   1/2     114   349 ..     1   275 []   437.6 1.6e-128
PF00102.17.ls   1/2     114   349 ..     1   275 []   439.4 4.5e-129
PF00102.17.fs   2/2     407   639 ..     1   275 []   426.4 3.7e-125
PF00102.17.ls   2/2     407   639 ..     1   275 []   428.2 1.1e-125

Alignments of top-scoring domains:
PF00102.17.fs: domain 1 of 2, from 114 to 349: score 437.6, E = 1.6e-128
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      NkeKNRy++ilpyDh+RV+L+p++g +dsDYINAs+i+g        
     bj00338   114    NKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFING-------- 152  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   y++++++Ia+QgP+++T++DFWrM+weq++++IVM+t+l E++    K C
     bj00338   153 YQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKE--CK-C 199  

                   aqYWPeeskeggsltyGditVtlvseekeadytvRtleltn.gdgskina
                   aqYWP+    +g +tyG+i+V +++++++ dytvR++ ++  gd      
     bj00338   200 AQYWPD----QGCWTYGNIRVSVEDVTVLVDYTVRKFCIQQvGD------ 239  

                   kqek..kgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnve
                      ++++ + r +t+fh+t+WPD+gvP + p ++l++l+kv+ ++p    
     bj00338   240 ---MtnRKPQRLITQFHFTSWPDFGVPFT-PIGMLKFLKKVKACNP---- 281  

                   lgerspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevid
                        + +g        ivVHCSAGvGRTGtf++id++l+++++e +v d
     bj00338   282 -----QYAG-------AIVVHCSAGVGRTGTFVVIDAMLDMMHTERKV-D 318  

                   vfdiVkelRsqRpgmVQteeQYiFlydaile<-*
                   v+++V+++R+qR++mVQt++QY+F+y+a+le   
     bj00338   319 VYGFVSRIRAQRCQMVQTDMQYVFIYQALLE    349  

PF00102.17.ls: domain 1 of 2, from 114 to 349: score 439.4, E = 4.5e-129
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      NkeKNRy++ilpyDh+RV+L+p++g +dsDYINAs+i+g        
     bj00338   114    NKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFING-------- 152  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   y++++++Ia+QgP+++T++DFWrM+weq++++IVM+t+l E++    K C
     bj00338   153 YQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLKERKE--CK-C 199  

                   aqYWPeeskeggsltyGditVtlvseekeadytvRtleltn.gdgskina
                   aqYWP+    +g +tyG+i+V +++++++ dytvR++ ++  gd      
     bj00338   200 AQYWPD----QGCWTYGNIRVSVEDVTVLVDYTVRKFCIQQvGD------ 239  

                   kqek..kgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnve
                      ++++ + r +t+fh+t+WPD+gvP + p ++l++l+kv+ ++p    
     bj00338   240 ---MtnRKPQRLITQFHFTSWPDFGVPFT-PIGMLKFLKKVKACNP---- 281  

                   lgerspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevid
                        + +g        ivVHCSAGvGRTGtf++id++l+++++e +v d
     bj00338   282 -----QYAG-------AIVVHCSAGVGRTGTFVVIDAMLDMMHTERKV-D 318  

                   vfdiVkelRsqRpgmVQteeQYiFlydaile<-*
                   v+++V+++R+qR++mVQt++QY+F+y+a+le   
     bj00338   319 VYGFVSRIRAQRCQMVQTDMQYVFIYQALLE    349  

PF00102.17.fs: domain 2 of 2, from 407 to 639: score 426.4, E = 3.7e-125
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N++KNR   i+py+++RV+ + ++g+e++DY+NAs+idg        
     bj00338   407    NMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDG-------- 445  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   y+++  yIa QgPl +TieDFWrM+we k+ +IVMLtel+E+g+  eK C
     bj00338   446 YRQKDSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQ--EK-C 492  

                   aqYWPeeskeggsltyGditVtlvseekeadytvRtleltn.gdgskina
                   aqYWP+    +g + yGditV+l++ee+++ ytvR l +tn+ +      
     bj00338   493 AQYWPS----DGLVSYGDITVELKKEEECESYTVRDLLVTNtRE------ 532  

                   kqekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvelg
                        +++r++++fh++gWP+ g+P++g k++++++  v+k+q++     
     bj00338   533 -----NKSRQIRQFHFHGWPEVGIPSDG-KGMISIIAAVQKQQQQ----- 571  

                   erspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidvf
                      +++        Pi+VHCSAG+GRTGtf+a++++l++++aeg   dvf
     bj00338   572 ---SGNH-------PITVHCSAGAGRTGTFCALSTVLERVKAEGIL-DVF 610  

                   diVkelRsqRpgmVQteeQYiFlydaile<-*
                   ++Vk+lR qRp+mVQt+eQY+F+y++++e   
     bj00338   611 QTVKSLRLQRPHMVQTLEQYEFCYKVVQE    639  

PF00102.17.ls: domain 2 of 2, from 407 to 639: score 428.2, E = 1.1e-125
                   *->NkeKNRykdilpyDhtRVkLkpipgdedsDYINAsyidgpivrllvv
                      N++KNR   i+py+++RV+ + ++g+e++DY+NAs+idg        
     bj00338   407    NMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDG-------- 445  

                   ykkpkayIaTQgPlpnTieDFWrMvweqkvtvIVMLtelvEkgrsseKtC
                   y+++  yIa QgPl +TieDFWrM+we k+ +IVMLtel+E+g+  eK C
     bj00338   446 YRQKDSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQ--EK-C 492  

                   aqYWPeeskeggsltyGditVtlvseekeadytvRtleltn.gdgskina
                   aqYWP+    +g + yGditV+l++ee+++ ytvR l +tn+ +      
     bj00338   493 AQYWPS----DGLVSYGDITVELKKEEECESYTVRDLLVTNtRE------ 532  

                   kqekkgetrtVthfhytgWPDhgvPesgpkslldllrkvrksqpsnvelg
                        +++r++++fh++gWP+ g+P++g k++++++  v+k+q++     
     bj00338   533 -----NKSRQIRQFHFHGWPEVGIPSDG-KGMISIIAAVQKQQQQ----- 571  

                   erspdsgprSystaPivVHCSAGvGRTGtfiaidillqqleaegevidvf
                      +++        Pi+VHCSAG+GRTGtf+a++++l++++aeg   dvf
     bj00338   572 ---SGNH-------PITVHCSAGAGRTGTFCALSTVLERVKAEGIL-DVF 610  

                   diVkelRsqRpgmVQteeQYiFlydaile<-*
                   ++Vk+lR qRp+mVQt+eQY+F+y++++e   
     bj00338   611 QTVKSLRLQRPHMVQTLEQYEFCYKVVQE    639  

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