hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-06363705/chunk_1/iprscan-20080807-06363705.nocrc
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Query sequence: bm00447
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00325                                                 168.7    5.9e-46   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00325    1/1     215   386 ..     1   211 []   168.7  5.9e-46

Alignments of top-scoring domains:
SM00325: domain 1 of 1, from 215 to 386: score 168.7, E = 5.9e-46
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      vl EL++TE+ YV+dL  +ve+++  +   +    +p   +   +++
     bm00447   215    VLSELVETEKMYVDDLGQIVEGYMATMAAQG----VPESLRGRDRIV 257  

                   FgpNieeiyefHrr.FLdeLeerveewllskdlKsernsviedsgerigd
                   Fg Ni+ iye Hr+ FL+eL  ++++                  ++ +++
     bm00447   258 FG-NIQQIYEWHRDyFLQELQRCLKD------------------PDWLAQ 288  

                   vFlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeies
                   +F+k+   e+++++Y  Yc+n+p+++++ ++        +   +++e+  
     bm00447   289 LFIKH---ERRLHMYVVYCQNKPKSEHVVSE--------FGDSYFEELRQ 327  

                   kpncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLk
                   +  +r      l+L +lLikPvQR++kY+LLLk+ lk++ ++  d  dL+
     bm00447   328 QLGHR------LQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTADLE 371  

                   kAleaikelasqvNe<-*
                   +A+e+++ +++++N+   
     bm00447   372 QAVEVMCFVPKRCND    386  

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