hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-06465242/chunk_1/iprscan-20080807-06465242.nocrc
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Query sequence: bm00505
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00622.18.fs SPRY domain                                     95.4    7.7e-27   2
PF00622.18.ls SPRY domain                                     75.4    1.6e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00622.18.fs   1/2     419   497 ..     1    97 [.    76.3  2.2e-21
PF00622.18.ls   1/1     419   521 ..     1   154 []    75.4  1.6e-19

Alignments of top-scoring domains:
PF00622.18.fs: domain 1 of 2, from 419 to 497: score 76.3, E = 2.2e-21
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      +G +YfE++vd+ ++ +t  r+Gw+++ +              + + 
     bm00505   419    KGAWYFEITVDEMPP-DTAARLGWSQPLG--------------NLQA 450  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                    lG+d++s+ +++++g+k+h++ + ++y++ +++ gdv G +++++++ t
     bm00505   451 PLGYDKFSYSWRSKKGTKFHQSIG-KHYSSGYGQ-GDVLGFYINLPED-T 497  

                   <-*
                      
     bm00505     -     -    

PF00622.18.ls: domain 1 of 1, from 419 to 521: score 75.4, E = 1.6e-19
                   *->sGkhYfEVevdtgggepthwrvGwatksvhlppgfdlrsskrkgger
                      +G +YfE++vd+ ++ +t  r+Gw+++ +              + + 
     bm00505   419    KGAWYFEITVDEMPP-DTAARLGWSQPLG--------------NLQA 450  

                   llGddegswgydgsggkkyhagesgepyglpfqekgdviGcflDyeagVt
                    lG+d++s+ +++++g+k+h++ + ++y++ +++ gdv G +++++++  
     bm00505   451 PLGYDKFSYSWRSKKGTKFHQSIG-KHYSSGYGQ-GDVLGFYINLPED-- 496  

                   isFtkNGkyLgdsEshiyaFrnvtfdkkpggpLyPavslgsadgggeair
                                    ++ ++  +d             +++d  ++ i+
     bm00505   497 -----------------TETAKSLPD-------------TYKD--KALIK 514  

                   lnfgqlp<-*
                   +  ++ +   
     bm00505   515 FKSYLYF    521  

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