hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-07034367/chunk_1/iprscan-20080807-07034367.nocrc
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Query sequence: bm00686
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF00118.14.ls TCP-1/cpn60 chaperonin family                549.4   3.3e-162   1
PF00118.14.fs TCP-1/cpn60 chaperonin family                547.4   1.4e-161   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF00118.14.fs   1/1      51   541 ..     1   537 []   547.4 1.4e-161
PF00118.14.ls   1/1      51   541 ..     1   537 []   549.4 3.3e-162

Alignments of top-scoring domains:
PF00118.14.fs: domain 1 of 1, from 51 to 541: score 547.4, E = 1.4e-161
                   *->ladivkttLGPkGrnKmlvngs..yGditiTnDGaTIlkeielqhPy
                      + d vk+tLGPkG++K+l++ s++++++ +TnDGaTIlk+i +++P 
     bm00686    51    IGDLVKSTLGPKGMDKILLS-SgrDASLMVTNDGATILKNIGVDNP- 95   

                   enlgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqI
                      +Ak+lv++s+ QddevGDGTT+v+vLA+eLL+eae+Li++++hP+ I
     bm00686    96 ---AAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTI 142  

                   irGyelAaekaleaLkklsipvetndk.inkeellkvAktslnsKvisgn
                   i+G ++A ++a eaL + +++  ++ +   + +l+++A t+l+sK+   +
     bm00686   143 IAGWREATKAAREALLSSAVDHGSD-EvKFRQDLMNIAGTTLSSKLLTHH 191  

                   siadAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisG
                   +++  ++k++v+av++++ +       +l+ i+++k+lGgs+ ds+l +G
     bm00686   192 KDH--FTKLAVEAVLRLK-GS-----GNLEAIHIIKKLGGSLADSYLDEG 233  

                   yvitkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviias
                   + ++k+       ++pkr+en aKI+++n  ++   +k ++  + v++ s
     bm00686   234 FLLDKKIGV----NQPKRIEN-AKILIANTGMD--TDKIKIFGSRVRVDS 276  

                   dedleaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtl
                   +++  ++  +E++k+k+kv+ i ++     g+n  i+++  i +   + +
     bm00686   277 TAKVAEIEHAEKEKMKEKVERILKH-----GINCFINRQ-LIYNYPEQLF 320  

                   adtvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeei
                           ag+ma++++     +rla+v+g+ + +t+++p+       ++
     bm00686   321 G------AAGVMAIEHADFAGVERLALVTGGEIASTFDHPE-----LVKL 359  

                   GerdevlekeigdstsddkvtkleerkarLsgkvatIllRGateveldEl
                   G+++ ++e++ig+    dk+  + ++     g ++tI+lRGat+++ldE+
     bm00686   360 GSCKLIEEVMIGE----DKLIHFSGVAL---GEACTIVLRGATQQILDEA 402  

                   errieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeqla
                   er+++DAl++  ++++d r V GGG+ E+ +a+a+++  a++++gke +a
     bm00686   403 ERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQL-ANRTPGKEAVA 451  

                   veafakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGydaat
                   +e++akAL+ +P i+A+NAG+d+ d++++Lra+h +Gn   +  G+d ++
     bm00686   452 MESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGN---TTAGLDMRE 498  

                   gkivdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-*
                   g+i dm+ +GI ++ +Vkrq+l +A+eaA  iL++D iI+a p   
     bm00686   499 GTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP    541  

PF00118.14.ls: domain 1 of 1, from 51 to 541: score 549.4, E = 3.3e-162
                   *->ladivkttLGPkGrnKmlvngs..yGditiTnDGaTIlkeielqhPy
                      + d vk+tLGPkG++K+l++ s++++++ +TnDGaTIlk+i +++P 
     bm00686    51    IGDLVKSTLGPKGMDKILLS-SgrDASLMVTNDGATILKNIGVDNP- 95   

                   enlgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqI
                      +Ak+lv++s+ QddevGDGTT+v+vLA+eLL+eae+Li++++hP+ I
     bm00686    96 ---AAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTI 142  

                   irGyelAaekaleaLkklsipvetndk.inkeellkvAktslnsKvisgn
                   i+G ++A ++a eaL + +++  ++ +   + +l+++A t+l+sK+   +
     bm00686   143 IAGWREATKAAREALLSSAVDHGSD-EvKFRQDLMNIAGTTLSSKLLTHH 191  

                   siadAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisG
                   +++  ++k++v+av++++ +       +l+ i+++k+lGgs+ ds+l +G
     bm00686   192 KDH--FTKLAVEAVLRLK-GS-----GNLEAIHIIKKLGGSLADSYLDEG 233  

                   yvitkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviias
                   + ++k+       ++pkr+en aKI+++n  ++   +k ++  + v++ s
     bm00686   234 FLLDKKIGV----NQPKRIEN-AKILIANTGMD--TDKIKIFGSRVRVDS 276  

                   dedleaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtl
                   +++  ++  +E++k+k+kv+ i ++     g+n  i+++  i +   + +
     bm00686   277 TAKVAEIEHAEKEKMKEKVERILKH-----GINCFINRQ-LIYNYPEQLF 320  

                   adtvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeei
                           ag+ma++++     +rla+v+g+ + +t+++p+       ++
     bm00686   321 G------AAGVMAIEHADFAGVERLALVTGGEIASTFDHPE-----LVKL 359  

                   GerdevlekeigdstsddkvtkleerkarLsgkvatIllRGateveldEl
                   G+++ ++e++ig+    dk+  + ++     g ++tI+lRGat+++ldE+
     bm00686   360 GSCKLIEEVMIGE----DKLIHFSGVAL---GEACTIVLRGATQQILDEA 402  

                   errieDAlnavkaaiedgriVPGGGaaEielakaLdkykakslegkeqla
                   er+++DAl++  ++++d r V GGG+ E+ +a+a+++  a++++gke +a
     bm00686   403 ERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQL-ANRTPGKEAVA 451  

                   veafakALeviPkiLAeNAGldgidviskLraehakGnsdlknyGydaat
                   +e++akAL+ +P i+A+NAG+d+ d++++Lra+h +Gn   +  G+d ++
     bm00686   452 MESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGN---TTAGLDMRE 498  

                   gkivdmveaGIiDplkVkrqalklAteaAsliLtiDdiImakp<-*
                   g+i dm+ +GI ++ +Vkrq+l +A+eaA  iL++D iI+a p   
     bm00686   499 GTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP    541  

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