hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-07034367/chunk_1/iprscan-20080807-07034367.nocrc
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Query sequence: bm00686
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
TIGR02341     chap_CCT_beta: T-complex protein 1, bet  1257.4          0   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
TIGR02341       1/1      26   544 ..     1   519 []  1257.4        0

Alignments of top-scoring domains:
TIGR02341: domain 1 of 1, from 26 to 544: score 1257.4, E = 0
                   *->qifkdsaqeERaEnARLssFvGAiAvGDLvKstLGPKGmDKiLlsas
                      +ifk++a+eERaE+ARL+sF+GAiA+GDLvKstLGPKGmDKiLls++
     bm00686    26    NIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSG 72   

                   seasivvtnDGAtiLKsiglDnpAAKvLvdiskvqDdEvGDGttsvtvla
                   ++as++vtnDGAtiLK+ig+DnpAAKvLvd+s+vqDdEvGDGttsvtvla
     bm00686    73 RDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLA 122  

                   AELLreAEklvnqkiHPqtiieGyReAtkaAleaLkksavdnssdevkfR
                   AELLreAE+l+++kiHPqtii+G+ReAtkaA+eaL +savd++sdevkfR
     bm00686   123 AELLREAESLIAKKIHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFR 172  

                   eDLlniArttLssKiLsqdKdHFaqLAvdAvLRLKGstnLeaiqiiKkLG
                   +DL+niA+ttLssK+L+++KdHF++LAv+AvLRLKGs+nLeai+iiKkLG
     bm00686   173 QDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHIIKKLG 222  

                   GklddsyLDEGFlLeKkiGvnqPkriEnAkiLiAntalDtDKvKvFGsrv
                   G+l+dsyLDEGFlL+KkiGvnqPkriEnAkiLiAnt++DtDK+K+FGsrv
     bm00686   223 GSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRV 272  

                   rvDstaKlAelEkAEkeKmKeKvekilkhninvFinRqLiYnyPEqLFad
                   rvDstaK+Ae+E+AEkeKmKeKve+ilkh+in+FinRqLiYnyPEqLF++
     bm00686   273 RVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGA 322  

                   agvmaiEHADFeGvERLaLvtGGEivstFDePelvklGsCdliEEimiGE
                   agvmaiEHADF+GvERLaLvtGGEi+stFD+PelvklGsC+liEE+miGE
     bm00686   323 AGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGE 372  

                   dkllkFsGvklGEACtivLRGAtqqiLDEaERslHDALcvLsqtvkesrt
                   dkl++FsGv+lGEACtivLRGAtqqiLDEaERslHDALcvL+qtvk+srt
     bm00686   373 DKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRT 422  

                   vlGgGcaEmlmakAveeeAqkvpGKkalAveafakALrqLPtilaDnAGf
                   v+GgGc+Emlma+Av+++A+++pGK+a+A+e++akALr+LPti+aDnAG+
     bm00686   423 VYGGGCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGY 472  

                   DsaeLvakLraahynGnstmGlDleeGeiaDmrklGivEsyklKravvss
                   Dsa+Lva+Lraah++Gn+t+GlD++eG+i+Dm++lGi+Es+++Kr+v++s
     bm00686   473 DSADLVAQLRAAHSEGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLS 522  

                   aaEaaevlLRvDniikAaPRkr<-*
                   aaEaaev+LRvDniikAaPRkr   
     bm00686   523 AAEAAEVILRVDNIIKAAPRKR    544  

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