hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-20292175/chunk_1/iprscan-20090617-20292175.nocrc
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Query sequence: bm00929
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.ls EF hand                                        110.6    4.1e-30   5
PF00036.22.fs EF hand                                        102.1    1.6e-27   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.ls   1/5      40    68 ..     1    29 []    24.7   0.0003
PF00036.22.fs   1/4      40    68 ..     1    29 []    22.7  3.8e-05
PF00036.22.ls   3/5     127   155 ..     1    29 []    33.1  9.2e-07
PF00036.22.fs   2/4     127   155 ..     1    29 []    31.1    2e-07
PF00036.22.fs   3/4     171   199 ..     1    29 []    14.6   0.0062
PF00036.22.ls   5/5     215   243 ..     1    29 []    35.6  1.5e-07
PF00036.22.fs   4/4     215   243 ..     1    29 []    33.6    4e-08

Alignments of top-scoring domains:
PF00036.22.ls: domain 1 of 5, from 40 to 68: score 24.7, E = 0.0003
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      ++ e++ +fD+Dg+G+++ +E+++++++l   
     bm00929    40    QFFEIWLHFDADGSGYLEGKELQNLIQEL    68   

PF00036.22.fs: domain 1 of 4, from 40 to 68: score 22.7, E = 3.8e-05
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      ++ e++ +fD+Dg+G+++ +E+++++++l   
     bm00929    40    QFFEIWLHFDADGSGYLEGKELQNLIQEL    68   

PF00036.22.ls: domain 3 of 5, from 127 to 155: score 33.1, E = 9.2e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+ + ++++D+D++G+I+ eE+k++lk+l   
     bm00929   127    EFMKTWRKYDTDHSGFIETEELKNFLKDL    155  

PF00036.22.fs: domain 2 of 4, from 127 to 155: score 31.1, E = 2e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+ + ++++D+D++G+I+ eE+k++lk+l   
     bm00929   127    EFMKTWRKYDTDHSGFIETEELKNFLKDL    155  

PF00036.22.fs: domain 3 of 4, from 171 to 199: score 14.6, E = 0.0062
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                        + + k+fD ++DGk+++ E+ ++l  +   
     bm00929   171    YTDLMLKLFDSNNDGKLELTEMARLLPVQ    199  

PF00036.22.ls: domain 5 of 5, from 215 to 243: score 35.6, E = 1.5e-07
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+++aF+++D+Dg+G+I+ +E+ a+lk+l   
     bm00929   215    EFNKAFELYDQDGNGYIDENELDALLKDL    243  

PF00036.22.fs: domain 4 of 4, from 215 to 243: score 33.6, E = 4e-08
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e+++aF+++D+Dg+G+I+ +E+ a+lk+l   
     bm00929   215    EFNKAFELYDQDGNGYIDENELDALLKDL    243  

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