hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-20354178/chunk_1/iprscan-20090617-20354178.nocrc
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Query sequence: bm00978
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                 114.9    9.2e-30   1
SM00061                                                  65.3    7.9e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00061    1/1      36   142 ..     1   123 []    65.3  7.9e-15
SM00225    1/1     200   297 ..     1   114 []   114.9  9.2e-30

Alignments of top-scoring domains:
SM00061: domain 1 of 1, from 36 to 142: score 65.3, E = 7.9e-15
                   *->vlshtfknvSkfKLa.teegesyfSpseehkggfnipWrlkikrkG.
                      +++ +f+  + +  ++++   s fS         +++W+l++++kG 
     bm00978    36    WTINNFSFCREE--MgEVIKSSTFSSGAN----DKLKWCLRVNPKGl 76   

                   ..gkngflglyLhCekeeceerlevkWsieaeftlkLvsqnGkslrsvir
                   +++++++l+lyL   ++ ++e       ++a+f+++++++ G +      
     bm00978    77 deESKDYLSLYLLLVSCPKSE-------VRAKFKFSILNAKGEET----- 114  

                   hvkfaskkdthvFekpsgwGfskFisWddL<-*
                     k + ++  ++F ++++wGf kFi++d L   
     bm00978   115 --KAMESQRAYRFVQGKDWGFKKFIRRDFL    142  

SM00225: domain 1 of 1, from 200 to 297: score 114.9, E = 9.2e-30
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      +D+ l v g         ++f+a  Hka+Laa+   Sp+F a+fe++
     bm00978   200    TDCCLCVAG---------QEFQA--HKAILAAR---SPVFSAMFEHe 232  

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                    ++++++++e++D      v pe+F+ ++ f+Yt+k    ++   ++++l
     bm00978   233 meeskknrVEIND------VEPEVFKEMMCFIYTgKAPNLDK---MADDL 273  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   L++Ad++     +++l+ +Ce++l++nl   
     bm00978   274 LAAADKY----ALErLKVMCEDALCSNL    297  

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