hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-08051050/chunk_1/iprscan-20080807-08051050.nocrc
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Query sequence: bm01109
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF00903.15.fs Glyoxalase/Bleomycin resistance protein/Di    38.0    9.3e-11   3
PF00903.15.ls Glyoxalase/Bleomycin resistance protein/Di    24.0     0.0005   2

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF00903.15.fs   1/3       5   104 ..     1   114 [.    19.5  2.4e-05
PF00903.15.ls   2/2     134   255 ..     1   149 []    17.3   0.0038

Alignments of top-scoring domains:
PF00903.15.fs: domain 1 of 3, from 5 to 104: score 19.5, E = 2.4e-05
                   *->ridHvanlrVgDleksldFYtdvLGfklveetdNdekysLyFl.y.d
                      r  H++   Vg+   +++FY+dvLG+k++++++        F ++ +
     bm01109     5    RALHFV-FKVGNRFQTARFYRDVLGMKVLRHEE--------FEeGcK 42   

                   dditgee.....gglryafftagg.vleLtlnetppppaagfikgirefd
                    + +g+++++ +  ++++ + +++ v+eLt+n++++++  g         
     bm01109    43 AACNGPYdgkwsKTMVGFGPEDDHfVAELTYNYGVGDYKLGN-------- 84   

                   egglhhiafiafsvdDvdaaydrlk<-*
                         ++ i+++  +     ++l+   
     bm01109    85 -----DFMGITLASSQAVSNARKLE    104  

PF00903.15.ls: domain 2 of 2, from 134 to 255: score 17.3, E = 0.0038
                   *->ridHva.n.lrVgDleksldFYtdvLGfklveetdNdekysLyFlyd
                      + d v++++l+V+Dl+ksl++++++LG+k+ e+ +            
     bm01109   134    QSDPVLkVtLAVSDLQKSLNYWCNLLGMKIYEKDE------------ 168  

                   dditgeegglryafftagg.vleLtlnetppppaagfikgirefdegglh
                         e  +      +++ +leL  + +  + aa f             
     bm01109   169 ------EKQRALLGYADNQcKLELQGVKGGVDHAAAF------------- 199  

                   hiafiafsvdDvdaaydrlkaaGvkivrepgrhgwggrysfyvh.frDPd
                   +  ++     ++  + d +k+   ki++++    + g++++ v+   DPd
     bm01109   200 GRIAFSCPQKELPDLEDLMKRENQKILTPLVSLDTPGKATVQVViLADPD 249  

                   GnliEl<-*
                   G++i++   
     bm01109   250 GHEICF    255  

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