hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-20415931/chunk_1/iprscan-20090617-20415931.nocrc
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Query sequence: bm01145
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00079.10.fs Serpin (serine protease inhibitor)             449.3   2.1e-135   1
PF00079.10.ls Serpin (serine protease inhibitor)             451.2   1.3e-132   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00079.10.fs   1/1      56   429 ..     1   397 []   449.3 2.1e-135
PF00079.10.ls   1/1      56   429 ..     1   397 []   451.2 1.3e-132

Alignments of top-scoring domains:
PF00079.10.fs: domain 1 of 1, from 56 to 429: score 449.3, E = 2.1e-135
                   *->ldsralkLasantdFAfsLYkqLveskspdkNiffSPvSIssALAml
                      l++ a++La+  + +AfsLY+++++     +Ni+ SPv ++s+L+++
     bm01145    56    LSPKAATLAERSAGLAFSLYQAMAK-DQAVENILVSPVVVASSLGLV 101  

                   sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqel.nrp
                   sLG k+ T++Q +++L+     + e         +h g+++Ll+ l+n++
     bm01145   102 SLGGKATTASQAKAVLSAEQLRDEE---------VHAGLGELLRSLsNST 142  

                   dkelqlttgnaLFvdkslkLldeFledvkklYqaevfsvDFsdapeeAkk
                   +  +++++g++L++  s+++ d+F+ ++k++Y++e+  ++F+d ++ A++
     bm01145   143 ARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRD-KRSALQ 191  

                   qINdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenT
                    IN+w ++ T+GK +++ +d  + ++   +LVN+++FK +W+++F+++++
     bm01145   192 SINEWAAQTTDGKLPEVTKD--VERTDGALLVNAMFFKPHWDEKFHHKMV 239  

                   reedFhvdkkttVkVPMMksqlgtfryTeyfrdeeLsckVleLpYkgnat
                    ++ F+v+ + tV V MM +++g+++   y++de ++ +++e+p++++ +
     bm01145   240 DNRGFMVTRSYTVGVMMM-HRTGLYN---YYDDEKEKLQIVEMPLAHKLS 285  

                   amfiLlPpdegkLeqvEaaLtpetlrkWtlknmtkrsveLyLPKFsIegt
                   +++iL+P+++ +Le++E+ Lt+e+l+ W + +m+k+ v ++LPK  +e t
     bm01145   286 SLIILMPHHVEPLERLEKLLTKEQLKIW-MGKMQKKAVAISLPKGVVEVT 334  

                   ydLksvLakLGItdlFseskADLsgisededLkVSkavHKAvLevdEeGt
                   +dL+++La LG+t++ +++kADLs +s+ +dL++  ++H    e+d +G 
     bm01145   335 HDLQKHLAGLGLTEAIDKNKADLSRMSGKKDLYLASVFHATAFELDTDGN 384  

                   EAaAATaaeivprsslppelevefkfdRPFLFlIrenpTgsiLFmGkVvn
                       + +++  +r s++     +f +d+PF+Fl+r+++ gs+LF+G+ v+
     bm01145   385 PFDQDIYGREELR-SPK-----LFYADHPFIFLVRDTQSGSLLFIGRLVR 428  

                   P<-*
                   P   
     bm01145   429 P    429  

PF00079.10.ls: domain 1 of 1, from 56 to 429: score 451.2, E = 1.3e-132
                   *->ldsralkLasantdFAfsLYkqLveskspdkNiffSPvSIssALAml
                      l++ a++La+  + +AfsLY+++++     +Ni+ SPv ++s+L+++
     bm01145    56    LSPKAATLAERSAGLAFSLYQAMAK-DQAVENILVSPVVVASSLGLV 101  

                   sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqel.nrp
                   sLG k+ T++Q +++L+     + e         +h g+++Ll+ l+n++
     bm01145   102 SLGGKATTASQAKAVLSAEQLRDEE---------VHAGLGELLRSLsNST 142  

                   dkelqlttgnaLFvdkslkLldeFledvkklYqaevfsvDFsdapeeAkk
                   +  +++++g++L++  s+++ d+F+ ++k++Y++e+  ++F+d ++ A++
     bm01145   143 ARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRD-KRSALQ 191  

                   qINdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenT
                    IN+w ++ T+GK +++ +d  + ++   +LVN+++FK +W+++F+++++
     bm01145   192 SINEWAAQTTDGKLPEVTKD--VERTDGALLVNAMFFKPHWDEKFHHKMV 239  

                   reedFhvdkkttVkVPMMksqlgtfryTeyfrdeeLsckVleLpYkgnat
                    ++ F+v+ + tV V MM +++g+++   y++de ++ +++e+p++++ +
     bm01145   240 DNRGFMVTRSYTVGVMMM-HRTGLYN---YYDDEKEKLQIVEMPLAHKLS 285  

                   amfiLlPpdegkLeqvEaaLtpetlrkWtlknmtkrsveLyLPKFsIegt
                   +++iL+P+++ +Le++E+ Lt+e+l+ W + +m+k+ v ++LPK  +e t
     bm01145   286 SLIILMPHHVEPLERLEKLLTKEQLKIW-MGKMQKKAVAISLPKGVVEVT 334  

                   ydLksvLakLGItdlFseskADLsgisededLkVSkavHKAvLevdEeGt
                   +dL+++La LG+t++ +++kADLs +s+ +dL++  ++H    e+d +G 
     bm01145   335 HDLQKHLAGLGLTEAIDKNKADLSRMSGKKDLYLASVFHATAFELDTDGN 384  

                   EAaAATaaeivprsslppelevefkfdRPFLFlIrenpTgsiLFmGkVvn
                       + +++  +r s++     +f +d+PF+Fl+r+++ gs+LF+G+ v+
     bm01145   385 PFDQDIYGREELR-SPK-----LFYADHPFIFLVRDTQSGSLLFIGRLVR 428  

                   P<-*
                   P   
     bm01145   429 P    429  

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