hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090617/iprscan-20090617-20415931/chunk_1/iprscan-20090617-20415931.nocrc
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Query sequence: bm01145
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00093                                                 465.3     3e-135   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00093    1/1      72   429 ..     1   372 []   465.3   3e-135

Alignments of top-scoring domains:
SM00093: domain 1 of 1, from 72 to 429: score 465.3, E = 3e-135
                   *->fdLykqLakesp..kNiffSPvSIssALamlsLGAkGsTatQilevL
                      f+Ly+++ak +   +Ni+ SPv ++s+L+++sLG k++Ta+Q ++vL
     bm01145    72    FSLYQAMAK-DQavENILVSPVVVASSLGLVSLGGKATTASQAKAVL 117  

                   gFnlteltseasddiHqgFqhLlselnkpdpneqleLktaNaLFvdkslk
                   + ++   + ++  ++H g+++Ll +l+++   +++++k++++L++  s++
     bm01145   118 SAEQ---LRDE--EVHAGLGELLRSLSNST-ARNVTWKLGSRLYGPSSVS 161  

                   lleeFledvkklYgaEvqsvdFsdpaeeAkkqINdwVekqTqGKIkdLls
                   + ++F++++k++Y++E++ ++F+d+ ++A+++IN+w ++ T+GK +++ +
     bm01145   162 FADDFVRSSKQHYNCEHSKINFRDK-RSALQSINEWAAQTTDGKLPEVTK 210  

                   egsld.dTrlvLVNaIyFKGkWkkpFdpenTreedFhvdetttVkVpMMs
                   +  + ++   +LVNa++FK +W+++F++++  ++ F+v+ + tV V MM+
     bm01145   211 D--VErTDGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSYTVGVMMMH 258  

                   qtgmkfnyghdeelscqvleLPYkGdnaSmliiLPdeveDsggLeqlEka
                   +tg  +ny+ de+ + q++e+P++++  S++i++P++ve   +Le lEk+
     bm01145   259 RTG-LYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHVE---PLERLEKL 304  

                   LtpetlkkWtklsltkrksveLyLPKFkleiSgsydLkddvLekLGitdl
                   Lt+e lk W+  +++k+  v ++LPK  +e   ++dL++ +L+ LG+t++
     bm01145   305 LTKEQLKIWMG-KMQKK-AVAISLPKGVVEV--THDLQK-HLAGLGLTEA 349  

                   FspskADLSgisedasedLkvSkvvHKAflEVnEeGtEAaAaTgviavpr
                    +++kADLS++s++  +dL++  v+H + +E++ +G       +++  +r
     bm01145   350 IDKNKADLSRMSGK--KDLYLASVFHATAFELDTDGNPFDQDIYGREELR 397  

                   ....fkanrPFLFlIrdnkTgsiLFmGkVvnP<-*
                   +++ f+a++PF+Fl+rd+++gs+LF+G+ v+P   
     bm01145   398 spklFYADHPFIFLVRDTQSGSLLFIGRLVRP    429  

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