hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-08380974/chunk_1/iprscan-20080807-08380974.nocrc
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Query sequence: bm01240
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00478.15.fs IMP dehydrogenase / GMP reductase domain       443.7   2.2e-130   2
PF00478.15.ls IMP dehydrogenase / GMP reductase domain       363.7   2.6e-106   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00478.15.ls   1/1      31   382 ..     1   370 []   363.7 2.6e-106
PF00478.15.fs   1/2      74   259 ..   102   293 ..   377.4   2e-110
PF00478.15.fs   2/2     322   382 ..   300   370 .]    66.3  2.3e-18

Alignments of top-scoring domains:
PF00478.15.ls: domain 1 of 1, from 31 to 382: score 363.7, E = 2.6e-106
                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   *->egLTFDDVLLlPgrStVlpsrvdVstrrfTkltrnitLniPlVSAaM
                               LlP+   +l  +   + +    l               
     bm01240    31    S-------VLLPAS--ILVAE---KFS----L--------------- 46   

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   DTVTEsrMAiAMAreGGiGvIHkNmsieeQaeeVrkVKrfyPnAskDaqg
                                    ++ +Hk++s  ++ e+          A    ++
     bm01240    47 -----------------FTAVHKHYSLVQWQEF----------AGQNPDC 69   

                RF xxxxxxxxxxxxxxxxxxxxxxxx  xxxxxxxxxxxxxxxxxxxxxxxx
                   rLlVgAAvGtrdddleRaeaLveA..GvDviViDsAHGHSegviemikri
                     + +A+ Gt++ d+e +e+  eA ++v++i++D+A+G+Se+++e++k +
     bm01240    70 LEHLAASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDV 119  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   KkkyPdeldViAGNVvTaeaaraLIdAGADavKVGIGPGSICTTRiVaGV
                   +k +P +++++AGNVvT+e++++LI++GAD++KVGIGPGS+CTTR ++GV
     bm01240   120 RKRFP-QHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGV 168  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   GvPGWQlTAVyevAeaArklGvPvIADGGIrysGDIaKALAaGAsaVMlG
                   G+P  Ql+AV+e+A+aA++l +++I+DGG++++GD+aKA++aGA++VMlG
     bm01240   169 GYP--QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLG 216  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx xx          
                   SlLAGTeEsPGeyiiynGrkyKsYRGMGSlgAMekrg.kg..........
                   ++LAG+ Es+Ge+i+++G+kyK ++GM+S  AM+k  + + + +   +++
     bm01240   217 GMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAgGVaeyryvwrpr 266  

                RF                                         x xxxxxxxx
                   ........................................e.hkGskdRY
                   +     ++++   +++  +++++  ++++  ++ +++ +  + +G+++ +
     bm01240   267 slvivwrqnswllrggwyssqrsmvnrgsmlgsvekslglRnPEGEDNKV 316  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   fqegvkdkklVPeGveGrVPyKGsvsdtihqlvgGLRssmgYvGaaslke
                   f     +++++   ve  VP+KG+v+ ti +++gG+Rs+++YvGaa+lke
     bm01240   317 FPTL-RASEGK--TVE--VPFKGDVEHTIRDILGGIRSTCTYVGAAKLKE 361  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxx   
                   LrekaysgevrffVRitsAglrEshvH<-*
                   L +++      +f+R+t++ +  +      
     bm01240   362 LSRRT------TFIRVTQQVNPIFSEA    382  

PF00478.15.fs: domain 1 of 2, from 74 to 259: score 377.4, E = 2e-110
                RF    xxxxxxxxxxxxxxxxxxxx  xxxxxxxxxxxxxxxxxxxxxxxxx
                   *->gAAvGtrdddleRaeaLveA..GvDviViDsAHGHSegviemikriK
                      +A+ Gt++ d+e +e+  eA ++v++i++D+A+G+Se+++e++k ++
     bm01240    74    AASSGTGSSDFEQLEQILEAipQVKYICLDVANGYSEHFVEFVKDVR 120  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   kkyPdeldViAGNVvTaeaaraLIdAGADavKVGIGPGSICTTRiVaGVG
                   k +P +++++AGNVvT+e++++LI++GAD++KVGIGPGS+CTTR ++GVG
     bm01240   121 KRFP-QHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVG 169  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   vPGWQlTAVyevAeaArklGvPvIADGGIrysGDIaKALAaGAsaVMlGS
                   +P  Ql+AV+e+A+aA++l +++I+DGG++++GD+aKA++aGA++VMlG+
     bm01240   170 YP--QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGG 217  

                RF xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   
                   lLAGTeEsPGeyiiynGrkyKsYRGMGSlgAMekrgkgehkGskdRY<-*
                   +LAG+ Es+Ge+i+++G+kyK ++GM+S  AM+k     ++G++++Y   
     bm01240   218 MLAGHSESGGELIERDGKKYKLFYGMSSEMAMKK-----YAGGVAEY    259  

PF00478.15.fs: domain 2 of 2, from 322 to 382: score 66.3, E = 2.3e-18
                RF    xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
                   *->dkklVPeGveGrVPyKGsvsdtihqlvgGLRssmgYvGaaslkeLre
                      +++++   ve  VP+KG+v+ ti +++gG+Rs+++YvGaa+lkeL +
     bm01240   322    ASEGK--TVE--VPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSR 364  

                RF xxxxxxxxxxxxxxxxxxxxxxxx   
                   kaysgevrffVRitsAglrEshvH<-*
                   ++      +f+R+t++ +  +      
     bm01240   365 RT------TFIRVTQQVNPIFSEA    382  

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