hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-08433246/chunk_1/iprscan-20080807-08433246.nocrc
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Query sequence: bm01247
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00191.10.ls Annexin                                        449.0   5.8e-132   4
PF00191.10.fs Annexin                                        441.1   1.4e-129   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00191.10.fs   1/4     209   274 ..     1    66 []   115.3  6.5e-32
PF00191.10.ls   1/4     209   274 ..     1    66 []   117.3    4e-32
PF00191.10.ls   2/4     281   346 ..     1    66 []   107.4    4e-29
PF00191.10.fs   2/4     281   346 ..     1    66 []   105.4  4.3e-29
PF00191.10.fs   3/4     364   430 ..     1    66 []   100.5  1.1e-27
PF00191.10.ls   3/4     364   430 ..     1    66 []   102.4  1.2e-27
PF00191.10.ls   4/4     440   505 ..     1    66 []   121.9  1.7e-33
PF00191.10.fs   4/4     440   505 ..     1    66 []   119.9  3.4e-33

Alignments of top-scoring domains:
PF00191.10.fs: domain 1 of 4, from 209 to 274: score 115.3, E = 6.5e-32
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      +DAe+LrkAmkg+GTDE+++I+ L++ sn q+q+I   +k+ ygkdL
     bm01247   209    RDAEVLRKAMKGFGTDEQAIIDCLGSCSNKQRQQILLSFKTAYGKDL 255  

                   ekdiksetSGdfeklLlaL<-*
                   +kd+kse+SG+fek +laL   
     bm01247   256 IKDLKSELSGNFEKTILAL    274  

PF00191.10.ls: domain 1 of 4, from 209 to 274: score 117.3, E = 4e-32
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      +DAe+LrkAmkg+GTDE+++I+ L++ sn q+q+I   +k+ ygkdL
     bm01247   209    RDAEVLRKAMKGFGTDEQAIIDCLGSCSNKQRQQILLSFKTAYGKDL 255  

                   ekdiksetSGdfeklLlaL<-*
                   +kd+kse+SG+fek +laL   
     bm01247   256 IKDLKSELSGNFEKTILAL    274  

PF00191.10.ls: domain 2 of 4, from 281 to 346: score 107.4, E = 4e-29
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      +D  ++++A+kg GTDE +lI+ILa+Rsn+++++  +aYk++++k+L
     bm01247   281    FDIYEIKEAIKGVGTDEACLIEILASRSNEHIRELNRAYKAEFKKTL 327  

                   ekdiksetSGdfeklLlaL<-*
                   e++i s+tSG+f++lL++L   
     bm01247   328 EEAIRSDTSGHFQRLLISL    346  

PF00191.10.fs: domain 2 of 4, from 281 to 346: score 105.4, E = 4.3e-29
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      +D  ++++A+kg GTDE +lI+ILa+Rsn+++++  +aYk++++k+L
     bm01247   281    FDIYEIKEAIKGVGTDEACLIEILASRSNEHIRELNRAYKAEFKKTL 327  

                   ekdiksetSGdfeklLlaL<-*
                   e++i s+tSG+f++lL++L   
     bm01247   328 EEAIRSDTSGHFQRLLISL    346  

PF00191.10.fs: domain 3 of 4, from 364 to 430: score 100.5, E = 1.1e-27
                   *->yDAe.lLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkd
                      +DA++l+ +++++lGTDE+ ++ +L++Rs a+l a++++Y++++g+d
     bm01247   364    RDAQeLYAAGENRLGTDESKFNAVLCSRSRAHLVAVFNEYQRMTGRD 410  

                   LekdiksetSGdfeklLlaL<-*
                   +ek+i++e+SGd+e+++la+   
     bm01247   411 IEKSICREMSGDLEEGMLAV    430  

PF00191.10.ls: domain 3 of 4, from 364 to 430: score 102.4, E = 1.2e-27
                   *->yDAe.lLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkd
                      +DA++l+ +++++lGTDE+ ++ +L++Rs a+l a++++Y++++g+d
     bm01247   364    RDAQeLYAAGENRLGTDESKFNAVLCSRSRAHLVAVFNEYQRMTGRD 410  

                   LekdiksetSGdfeklLlaL<-*
                   +ek+i++e+SGd+e+++la+   
     bm01247   411 IEKSICREMSGDLEEGMLAV    430  

PF00191.10.ls: domain 4 of 4, from 440 to 505: score 121.9, E = 1.7e-33
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      ++Ae+L+kAm+g+GT + tlIrI+++Rs+ +l++I+ +Yk++ygk+L
     bm01247   440    FFAERLNKAMRGAGTKDRTLIRIMVSRSETDLLDIRSEYKRMYGKSL 486  

                   ekdiksetSGdfeklLlaL<-*
                   ++di ++tSGd++k+Ll +   
     bm01247   487 YHDISGDTSGDYRKILLKI    505  

PF00191.10.fs: domain 4 of 4, from 440 to 505: score 119.9, E = 3.4e-33
                   *->yDAelLrkAmkglGTDEdtlIrILatRsnaqlqaIkeaYkklygkdL
                      ++Ae+L+kAm+g+GT + tlIrI+++Rs+ +l++I+ +Yk++ygk+L
     bm01247   440    FFAERLNKAMRGAGTKDRTLIRIMVSRSETDLLDIRSEYKRMYGKSL 486  

                   ekdiksetSGdfeklLlaL<-*
                   ++di ++tSGd++k+Ll +   
     bm01247   487 YHDISGDTSGDYRKILLKI    505  

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