hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-09173693/chunk_1/iprscan-20080807-09173693.nocrc
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Query sequence: bm01376
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00291                                                  74.4    1.4e-17   1
SM00165                                                  34.7    1.3e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00291    1/1      61   104 ..     1    46 []    74.4  1.4e-17
SM00165    1/1     333   372 ..     1    38 []    34.7  1.3e-05

Alignments of top-scoring domains:
SM00291: domain 1 of 1, from 61 to 104: score 74.4, E = 1.4e-17
                   *->vhhsvsCdgCgkepivgvRYkClvCpDYDLCesCfakGghhgeHam<
                      vh +v+CdgC++ p vg+RYkC+vCpDYDLC+ C+ k g h  H + 
     bm01376    61    VHPNVICDGCNG-PVVGTRYKCSVCPDYDLCSVCEGK-GLHRGHTK  104  

                   -*
                     
     bm01376     -    -    

SM00165: domain 1 of 1, from 333 to 372: score 34.7, E = 1.3e-05
                   *->deekieqLleMGFsre..eavdALratngNverAaeyLls<-*
                      + e++ q+l+MGFs+e++++ + L+  n+++ +A++ + +   
     bm01376   333    LIESLSQMLSMGFSDEggWLTRLLQTKNYDIGAALDTIQY    372  

//