hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080807/iprscan-20080807-09390852/chunk_1/iprscan-20080807-09390852.nocrc
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Query sequence: bm01524
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           38.1      6e-13   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           39.9    8.3e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     581   621 ..     1    50 []    38.1    6e-13
PF00097.15.ls   1/1     581   621 ..     1    50 []    39.9  8.3e-09

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 581 to 621: score 38.1, E = 6e-13
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IC+ e+   +  ++++lpC+H      f+++C++ wl+  ++ tC
     bm01524   581    CPICCSEYVKGE--VATELPCHHY-----FHKPCVSIWLQ--KSGTC 618  

                   plC<-*
                   p+C   
     bm01524   619 PVC    621  

PF00097.15.ls: domain 1 of 1, from 581 to 621: score 39.9, E = 8.3e-09
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IC+ e+   +  ++++lpC+H      f+++C++ wl+  ++ tC
     bm01524   581    CPICCSEYVKGE--VATELPCHHY-----FHKPCVSIWLQ--KSGTC 618  

                   plC<-*
                   p+C   
     bm01524   619 PVC    621  

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