# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Obm01529.fasta.nr -Q bm01529.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 bm01529, 210 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6824388 sequences Expectation_n fit: rho(ln(x))= 4.6598+/-0.000182; mu= 10.7680+/- 0.010 mean_var=63.4483+/-12.193, 0's: 39 Z-trim: 43 B-trim: 0 in 0/65 Lambda= 0.161014 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|62089130|dbj|BAD93009.1| steroidogenic acute re ( 210) 1422 338.3 4.4e-91 gi|114667694|ref|XP_001172243.1| PREDICTED: steroi ( 412) 1060 254.4 1.5e-65 gi|114667692|ref|XP_001172209.1| PREDICTED: steroi ( 427) 1060 254.5 1.5e-65 gi|951279|emb|CAA56489.1| MLN 64 [Homo sapiens] ( 445) 1060 254.5 1.6e-65 gi|116242802|sp|Q14849.2|STAR3_HUMAN StAR-related ( 445) 1060 254.5 1.6e-65 gi|190690895|gb|ACE87222.1| StAR-related lipid tra ( 445) 1060 254.5 1.6e-65 gi|19343637|gb|AAH25679.1| StAR-related lipid tran ( 445) 1060 254.5 1.6e-65 gi|114667682|ref|XP_523622.2| PREDICTED: steroidog ( 445) 1060 254.5 1.6e-65 gi|30584763|gb|AAP36634.1| Homo sapiens START doma ( 446) 1060 254.5 1.6e-65 gi|149723882|ref|XP_001501231.1| PREDICTED: simila ( 446) 1042 250.3 2.9e-64 gi|76644561|ref|XP_874471.1| PREDICTED: similar to ( 448) 1037 249.1 6.5e-64 gi|73966094|ref|XP_863777.1| PREDICTED: similar to ( 412) 1034 248.4 9.8e-64 gi|73966098|ref|XP_851474.1| PREDICTED: similar to ( 445) 1034 248.4 1e-63 gi|73966092|ref|XP_863752.1| PREDICTED: similar to ( 451) 1034 248.4 1.1e-63 gi|7766869|pdb|1EM2|A Chain A, Star-Related Lipid ( 229) 1029 247.0 1.4e-63 gi|148684187|gb|EDL16134.1| START domain containin ( 404) 1027 246.8 3e-63 gi|6225683|sp|Q61542.1|STAR3_MOUSE StAR-related li ( 446) 1027 246.8 3.2e-63 gi|148684186|gb|EDL16133.1| START domain containin ( 462) 1027 246.8 3.3e-63 gi|109114884|ref|XP_001089498.1| PREDICTED: steroi ( 445) 1026 246.6 3.8e-63 gi|149054106|gb|EDM05923.1| rCG33556, isoform CRA_ ( 398) 1023 245.8 5.6e-63 gi|55250585|gb|AAH85872.1| START domain containing ( 446) 1023 245.9 6.1e-63 gi|126308160|ref|XP_001366369.1| PREDICTED: simila ( 446) 946 228.0 1.5e-57 gi|193784743|dbj|BAG53896.1| unnamed protein produ ( 139) 920 221.5 4.1e-56 gi|118117015|ref|XP_001232168.1| PREDICTED: simila ( 444) 925 223.1 4.4e-56 gi|47218854|emb|CAG02839.1| unnamed protein produc ( 444) 869 210.1 3.6e-52 gi|11066486|gb|AAG28603.1|AF258786_1 MLN64-like pr ( 239) 863 208.5 5.9e-52 gi|21362665|sp|Q90ZB9.1|STAR3_SALFO StAR-related l ( 294) 863 208.6 6.9e-52 gi|78100386|sp|Q9DFS4.2|STAR3_DANRE StAR-related l ( 448) 863 208.7 9.5e-52 gi|119580988|gb|EAW60584.1| START domain containin ( 264) 849 205.3 6.1e-51 gi|34784618|gb|AAH57738.1| MGC68989 protein [Xenop ( 444) 840 203.4 3.8e-50 gi|49115507|gb|AAH73419.1| MGC80895 protein [Xenop ( 448) 838 202.9 5.3e-50 gi|55728495|emb|CAH90990.1| hypothetical protein [ ( 501) 835 202.3 9.4e-50 gi|49899718|gb|AAH76666.1| START domain containing ( 448) 828 200.6 2.7e-49 gi|21362965|sp|Q9DG09|STAR_CHICK Steroidogenic acu ( 281) 399 100.8 1.9e-19 gi|45439548|gb|AAS64369.1| steroidogenic acute reg ( 284) 398 100.5 2.2e-19 gi|45439550|gb|AAS64370.1| steroidogenic acute reg ( 284) 398 100.5 2.2e-19 gi|149548576|ref|XP_001519505.1| PREDICTED: simila ( 309) 389 98.5 1e-18 gi|21362966|sp|Q9DG10|STAR_BRARE Steroidogenic acu ( 285) 387 98.0 1.3e-18 gi|157169282|gb|ABV25959.1| steroidogenic acute re ( 286) 383 97.1 2.5e-18 gi|89474611|gb|ABD73012.1| steroidogenic acute reg ( 259) 380 96.3 3.8e-18 gi|73915382|gb|AAZ92554.1| steroidogenic acute reg ( 286) 380 96.4 4e-18 gi|31323272|gb|AAP44112.1| steroidogenic acute reg ( 286) 380 96.4 4e-18 gi|109627819|gb|ABG34343.1| mitochondrial steroido ( 286) 380 96.4 4e-18 gi|31323270|gb|AAP44111.1| steroidogenic acute reg ( 286) 380 96.4 4e-18 gi|21362963|sp|Q9DE06|STAR_SALFO Steroidogenic acu ( 287) 378 95.9 5.6e-18 gi|121308629|dbj|BAF43707.1| steroidogenic acute r ( 147) 374 94.7 6.5e-18 gi|20140240|sp|Q9DEB4|STAR_ONCMY Steroidogenic acu ( 287) 377 95.7 6.6e-18 gi|29243194|dbj|BAC66210.1| steroidogenic acute re ( 285) 373 94.7 1.2e-17 gi|47209041|emb|CAF91743.1| unnamed protein produc ( 281) 372 94.5 1.4e-17 gi|2498963|sp|P70114|STAR_MESAU Steroidogenic acut ( 284) 372 94.5 1.5e-17 >>gi|62089130|dbj|BAD93009.1| steroidogenic acute regula (210 aa) initn: 1422 init1: 1422 opt: 1422 Z-score: 1790.4 bits: 338.3 E(): 4.4e-91 Smith-Waterman score: 1422; 100.000% identity (100.000% similar) in 210 aa overlap (1-210:1-210) 10 20 30 40 50 60 bm0152 VRGAGVLEPQTAQEAPGRCRGALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VRGAGVLEPQTAQEAPGRCRGALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAEL 10 20 30 40 50 60 70 80 90 100 110 120 bm0152 VYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIER 70 80 90 100 110 120 130 140 150 160 170 180 bm0152 RRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RRDRYLSSGIATSHSAKPPTHKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLP 130 140 150 160 170 180 190 200 210 bm0152 RYLIHQSLAATMFEFAFHLRQRISELGARA :::::::::::::::::::::::::::::: gi|620 RYLIHQSLAATMFEFAFHLRQRISELGARA 190 200 210 >>gi|114667694|ref|XP_001172243.1| PREDICTED: steroidoge (412 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1332.0 bits: 254.4 E(): 1.5e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:253-412) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|114 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 230 240 250 260 270 280 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 290 300 310 320 330 340 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 350 360 370 380 390 400 210 bm0152 QRISELGARA :::::::::: gi|114 QRISELGARA 410 >>gi|114667692|ref|XP_001172209.1| PREDICTED: steroidoge (427 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.8 bits: 254.5 E(): 1.5e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:268-427) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|114 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 240 250 260 270 280 290 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 300 310 320 330 340 350 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 360 370 380 390 400 410 210 bm0152 QRISELGARA :::::::::: gi|114 QRISELGARA 420 >>gi|951279|emb|CAA56489.1| MLN 64 [Homo sapiens] gi (445 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.6 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|951 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|951 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|951 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|951 QRISELGARA 440 >>gi|116242802|sp|Q14849.2|STAR3_HUMAN StAR-related lipi (445 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.6 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|116 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|116 QRISELGARA 440 >>gi|190690895|gb|ACE87222.1| StAR-related lipid transfe (445 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.6 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|190 EENWKFEKNNEYGGTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|190 QRISELGARA 440 >>gi|19343637|gb|AAH25679.1| StAR-related lipid transfer (445 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.6 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|193 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|193 QRISELGARA 440 >>gi|114667682|ref|XP_523622.2| PREDICTED: steroidogenic (445 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.6 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|114 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|114 QRISELGARA 440 >>gi|30584763|gb|AAP36634.1| Homo sapiens START domain c (446 aa) initn: 1060 init1: 1060 opt: 1060 Z-score: 1331.5 bits: 254.5 E(): 1.6e-65 Smith-Waterman score: 1060; 99.375% identity (100.000% similar) in 160 aa overlap (51-210:286-445) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|305 EENWKFEKNNEYGDTVYTIEVPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::::::::: gi|305 QRISELGARAL 440 >>gi|149723882|ref|XP_001501231.1| PREDICTED: similar to (446 aa) initn: 1042 init1: 1042 opt: 1042 Z-score: 1308.9 bits: 250.3 E(): 2.9e-64 Smith-Waterman score: 1042; 96.875% identity (98.750% similar) in 160 aa overlap (51-210:287-446) 30 40 50 60 70 80 bm0152 GALWWVPPTKREGLVCPSPSGTTQPSAALSQTFLPCPAELVYQEVILQPERMVLWNKTVT .::::::::::::::::::::::::::::: gi|149 EENWKFEKNNEYGDTVYTIEIPFHGKTFILKTFLPCPAELVYQEVILQPERMVLWNKTVT 260 270 280 290 300 310 90 100 110 120 130 140 bm0152 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHSAKPPT :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|149 ACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRRIERRRDRYLSSGIATSHCAKPPT 320 330 340 350 360 370 150 160 170 180 190 200 bm0152 HKYVRGENGPGGFIVLKSASNPRVCTFVWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR ::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::: gi|149 HKYVRGENGPGGFIVLKPASNPRVCTFIWILNTDLKGRLPRYLIHQSLAATMFEFAFHLR 380 390 400 410 420 430 210 bm0152 QRISELGARA :::.:::::: gi|149 QRIGELGARA 440 210 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Thu Aug 7 09:42:09 2008 done: Thu Aug 7 09:44:57 2008 Total Scan time: 652.400 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]